Conservation of cofitness between HSERO_RS22660 and HSERO_RS12105 in Herbaspirillum seropedicae SmR1

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS22660 tricarboxylate transporter 1.0 HSERO_RS12105 RpiR family transcriptional regulator 0.32 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1560 Tricarboxylate transport protein TctC 0.34 GFF883 Predicted transcriptional regulator of the myo-inositol catabolic operon low > 78
Dickeya dadantii 3937 0.52 DDA3937_RS14490 tripartite tricarboxylate transporter substrate binding protein 0.34 DDA3937_RS03665 MurR/RpiR family transcriptional regulator low > 74
Klebsiella michiganensis M5al 0.52 BWI76_RS20035 hypothetical protein 0.32 BWI76_RS03080 (Fe-S)-cluster assembly protein low > 92
Enterobacter sp. TBS_079 0.51 MPMX20_03193 hypothetical protein 0.32 MPMX20_03376 HTH-type transcriptional regulator MurR low > 85
Pantoea sp. MT58 0.51 IAI47_06210 tripartite tricarboxylate transporter substrate binding protein 0.33 IAI47_01475 MurR/RpiR family transcriptional regulator low > 76
Dickeya dianthicola 67-19 0.51 HGI48_RS14460 tripartite tricarboxylate transporter substrate binding protein 0.34 HGI48_RS03725 SIS domain-containing protein low > 71
Dickeya dianthicola ME23 0.51 DZA65_RS15395 tripartite tricarboxylate transporter substrate binding protein 0.33 DZA65_RS03850 MurR/RpiR family transcriptional regulator low > 75
Serratia liquefaciens MT49 0.51 IAI46_17880 tripartite tricarboxylate transporter substrate binding protein 0.33 IAI46_24010 MurR/RpiR family transcriptional regulator low > 86
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_3313 Tricarboxylate transport protein TctC 0.56 Pf1N1B4_4273 Predicted transcriptional regulator of the myo-inositol catabolic operon low > 87
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_17580 tricarboxylic transporter 0.56 AO353_21330 RpiR family transcriptional regulator low > 101
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_3966 Uncharacterized protein UPF0065 0.56 Psyr_3275 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_3966 Uncharacterized protein UPF0065 0.56 Psyr_3275 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) low > 86
Pseudomonas simiae WCS417 0.47 PS417_07075 tricarboxylic transport membrane protein 0.56 PS417_11845 RpiR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_04615 tricarboxylic transporter 0.56 AO356_23155 RpiR family transcriptional regulator low > 104
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.56 PFLU_RS12580 MurR/RpiR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.56 PFLU_RS12580 MurR/RpiR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_2768 Tricarboxylate transport protein TctC 0.56 Pf6N2E2_510 Predicted transcriptional regulator of the myo-inositol catabolic operon low > 103
Pseudomonas sp. RS175 0.46 PFR28_00681 hypothetical protein 0.56 PFR28_02426 HTH-type transcriptional regulator MurR low > 88
Sinorhizobium meliloti 1021 0.17 SM_b20724 hypothetical protein 0.27 SMc01164 hypothetical protein low > 103
Rhizobium sp. OAE497 0.16 ABIE40_RS16420 tripartite tricarboxylate transporter substrate binding protein 0.22 ABIE40_RS05995 MurR/RpiR family transcriptional regulator low > 107

Not shown: 10 genomes with orthologs for HSERO_RS22660 only; 15 genomes with orthologs for HSERO_RS12105 only