Conservation of cofitness between HGI48_RS20730 and HGI48_RS19555 in Dickeya dianthicola 67-19

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS20730 high-affinity branched-chain amino acid ABC transporter substrate-binding protein 1.0 HGI48_RS19555 phosphoribulokinase 0.82 4
Dickeya dianthicola ME23 0.99 DZA65_RS21740 branched-chain amino acid ABC transporter substrate-binding protein 0.99 DZA65_RS20640 phosphoribulokinase low > 75
Dickeya dadantii 3937 0.99 DDA3937_RS00660 branched-chain amino acid ABC transporter substrate-binding protein 0.98 DDA3937_RS19435 phosphoribulokinase low > 74
Pectobacterium carotovorum WPP14 0.90 HER17_RS00495 branched-chain amino acid ABC transporter substrate-binding protein 0.92 HER17_RS01925 phosphoribulokinase 0.92 25
Serratia liquefaciens MT49 0.88 IAI46_00960 branched-chain amino acid ABC transporter substrate-binding protein 0.87 IAI46_23570 phosphoribulokinase low > 86
Rahnella sp. WP5 0.87 EX31_RS14805 branched-chain amino acid ABC transporter substrate-binding protein 0.86 EX31_RS04610 phosphoribulokinase low > 89
Erwinia tracheiphila SCR3 0.85 LU632_RS19255 branched-chain amino acid ABC transporter substrate-binding protein 0.85 LU632_RS22790 phosphoribulokinase low > 74
Escherichia coli ECOR38 0.79 HEPCGN_15550 livJ branched chain amino acid ABC transporter substrate-binding protein LivJ 0.88 HEPCGN_16075 prkB phosphoribulokinase low > 87
Escherichia coli ECRC62 0.79 BNILDI_02990 livJ branched chain amino acid ABC transporter substrate-binding protein LivJ 0.88 BNILDI_02470 prkB phosphoribulokinase low > 75
Escherichia coli ECRC100 0.79 OKFHMN_16720 livJ branched chain amino acid ABC transporter substrate-binding protein LivJ 0.87 OKFHMN_17250 prkB phosphoribulokinase low > 80
Escherichia coli Nissle 1917 0.79 ECOLIN_RS19790 branched chain amino acid ABC transporter substrate-binding protein LivJ 0.87 ECOLIN_RS19215 phosphoribulokinase low > 55
Escherichia coli ECRC98 0.79 JDDGAC_20350 livJ branched chain amino acid ABC transporter substrate-binding protein LivJ 0.87 JDDGAC_20880 prkB phosphoribulokinase low > 86
Escherichia coli ECRC99 0.79 KEDOAH_11420 livJ branched chain amino acid ABC transporter substrate-binding protein LivJ 0.87 KEDOAH_10890 prkB phosphoribulokinase — —
Escherichia coli ECRC101 0.79 MCAODC_07250 livJ branched chain amino acid ABC transporter substrate-binding protein LivJ 0.87 MCAODC_07780 prkB phosphoribulokinase low > 87
Escherichia coli ECRC102 0.79 NIAGMN_14490 livJ branched chain amino acid ABC transporter substrate-binding protein LivJ 0.87 NIAGMN_15020 prkB phosphoribulokinase — —
Escherichia coli ECOR27 0.79 NOLOHH_08525 livJ branched chain amino acid ABC transporter substrate-binding protein LivJ 0.87 NOLOHH_09050 prkB phosphoribulokinase low > 75
Escherichia coli BW25113 0.79 b3460 livJ leucine/isoleucine/valine transporter subunit (NCBI) 0.88 b3355 prkB predicted phosphoribulokinase (NCBI) low > 76
Escherichia fergusonii Becca 0.79 EFB2_00362 Leu/Ile/Val-binding protein 0.88 EFB2_00467 Phosphoribulokinase, plasmid low > 86
Escherichia coli BL21 0.79 ECD_03309 branched-chain amino acid ABC transporter periplasmic binding protein 0.88 ECD_03206 putative phosphoribulokinase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_00243 Leu/Ile/Val-binding protein 0.88 OHPLBJKB_00347 Phosphoribulokinase, plasmid low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF545 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.88 GFF3714 Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown low > 78
Klebsiella michiganensis M5al 0.79 BWI76_RS26365 branched chain amino acid ABC transporter substrate-binding protein 0.87 BWI76_RS25975 phosphoribulokinase low > 92
Pantoea sp. MT58 0.78 IAI47_01565 branched-chain amino acid ABC transporter substrate-binding protein 0.86 IAI47_01975 phosphoribulokinase low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_04334 Leucine-specific-binding protein 0.89 MPMX20_04258 Phosphoribulokinase, plasmid low > 85
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4290 ABC-type branched-chain amino acid transport systems, periplasmic component 0.88 EX28DRAFT_4174 Phosphoribulokinase low > 76
Marinobacter adhaerens HP15 0.59 HP15_3055 high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein 0.53 HP15_3311 phosphoribulokinase low > 73
Azospirillum sp. SherDot2 0.39 MPMX19_04840 Leu/Ile/Val-binding protein 0.56 MPMX19_02943 Phosphoribulokinase, chromosomal low > 112
Rhodospirillum rubrum S1H 0.38 Rru_A1746 Extracellular ligand-binding receptor (NCBI) 0.57 Rru_A2404 Phosphoribulokinase (NCBI) low > 58
Sinorhizobium meliloti 1021 0.37 SMc00078 Leu/Ile/Val-binding protein 0.52 SM_b20201 phosphoribulokinase low > 103
Rhodopseudomonas palustris CGA009 0.37 TX73_019730 branched-chain amino acid ABC transporter substrate-binding protein 0.54 TX73_024115 phosphoribulokinase — —
Magnetospirillum magneticum AMB-1 0.35 AMB_RS15010 branched-chain amino acid ABC transporter substrate-binding protein 0.54 AMB_RS13555 phosphoribulokinase low > 64
Variovorax sp. OAS795 0.30 ABID97_RS27585 branched-chain amino acid ABC transporter substrate-binding protein 0.60 ABID97_RS12880 phosphoribulokinase low > 91
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_02161 amino acid/amide ABC transporter substrate-binding protein, HAAT family 0.55 H281DRAFT_01313 phosphoribulokinase low > 103
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS31655 branched-chain amino acid ABC transporter substrate-binding protein 0.58 QEN71_RS32780 phosphoribulokinase low > 153
Paraburkholderia graminis OAS925 0.24 ABIE53_000461 branched-chain amino acid transport system substrate-binding protein 0.54 ABIE53_005500 phosphoribulokinase low > 113

Not shown: 33 genomes with orthologs for HGI48_RS20730 only; 8 genomes with orthologs for HGI48_RS19555 only