Conservation of cofitness between HGI48_RS17360 and HGI48_RS16175 in Dickeya dianthicola 67-19

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS17360 YggU family protein 1.0 HGI48_RS16175 methyltransferase domain-containing protein 0.47 15
Dickeya dianthicola ME23 1.00 DZA65_RS18450 YggU family protein 1.00 DZA65_RS17260 class I SAM-dependent methyltransferase low > 75
Dickeya dadantii 3937 0.97 DDA3937_RS17315 YggU family protein 0.96 DDA3937_RS16055 class I SAM-dependent methyltransferase low > 74
Pectobacterium carotovorum WPP14 0.86 HER17_RS03795 DUF167 family protein YggU 0.60 HER17_RS05460 class I SAM-dependent methyltransferase low > 75
Enterobacter sp. TBS_079 0.86 MPMX20_03811 hypothetical protein 0.56 MPMX20_00898 hypothetical protein low > 85
Serratia liquefaciens MT49 0.85 IAI46_21425 YggU family protein 0.63 IAI46_04140 class I SAM-dependent methyltransferase low > 86
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2991 TIGR00251 family protein 0.57 EX28DRAFT_2681 Methyltransferase domain low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS24110 YggU family protein 0.55 BWI76_RS05445 type 11 methyltransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF3056 COG1872 0.53 GFF4045 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) low > 78
Escherichia coli ECRC99 0.82 KEDOAH_08895 yggU DUF167 domain-containing protein 0.55 KEDOAH_18180 yafS Uncharacterized protein YafS — —
Escherichia coli ECRC98 0.82 JDDGAC_22875 yggU DUF167 domain-containing protein 0.55 JDDGAC_13570 yafS Uncharacterized protein YafS low > 86
Escherichia coli ECRC100 0.82 OKFHMN_19245 yggU DUF167 domain-containing protein 0.55 OKFHMN_09975 yafS Uncharacterized protein YafS low > 80
Escherichia coli ECRC102 0.82 NIAGMN_17010 yggU DUF167 domain-containing protein 0.55 NIAGMN_07825 yafS Uncharacterized protein YafS — —
Escherichia coli ECRC101 0.82 MCAODC_09765 yggU DUF167 domain-containing protein 0.55 MCAODC_00490 yafS Uncharacterized protein YafS low > 87
Escherichia coli ECRC62 0.81 BNILDI_09695 yggU DUF167 domain-containing protein 0.56 BNILDI_09350 yafS Uncharacterized protein YafS low > 75
Escherichia coli ECOR38 0.81 HEPCGN_18550 yggU DUF167 domain-containing protein 0.55 HEPCGN_07915 yafS Uncharacterized protein YafS low > 87
Escherichia fergusonii Becca 0.81 EFB2_00949 hypothetical protein 0.55 EFB2_03830 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.81 ECOLIN_RS16425 DUF167 family protein YggU 0.55 ECOLIN_RS01165 class I SAM-dependent methyltransferase low > 55
Escherichia coli BL21 0.81 ECD_02783 UPF0235 family protein 0.55 ECD_00206 putative S-adenosyl-L-methionine-dependent methyltransferase low > 61
Escherichia coli ECOR27 0.81 NOLOHH_11115 yggU DUF167 domain-containing protein 0.55 NOLOHH_02320 yafS Uncharacterized protein YafS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00763 hypothetical protein 0.56 OHPLBJKB_03448 hypothetical protein low > 73
Escherichia coli BW25113 0.81 b2953 yggU orf, hypothetical protein (VIMSS) 0.55 b0213 yafS orf, hypothetical protein (VIMSS) low > 76
Shewanella loihica PV-4 0.76 Shew_1134 hypothetical protein (RefSeq) 0.26 Shew_2113 hypothetical protein (RefSeq) — —
Rahnella sp. WP5 0.74 EX31_RS02700 YggU family protein 0.61 EX31_RS21195 class I SAM-dependent methyltransferase low > 89
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_02440 YggU family protein 0.39 CSW01_11390 class I SAM-dependent methyltransferase low > 62
Shewanella oneidensis MR-1 0.68 SO3356 conserved hypothetical protein TIGR00251 (NCBI ptt file) 0.31 SO2562 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.68 Shewana3_1191 hypothetical protein (RefSeq) 0.31 Shewana3_2368 methyltransferase type 11 (RefSeq) — —
Shewanella amazonensis SB2B 0.67 Sama_2480 hypothetical protein (RefSeq) 0.32 Sama_1883 hypothetical protein (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_08175 hypothetical protein 0.11 AO353_23495 SAM-dependent methyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_4598 COG1872 0.11 Pf6N2E2_588 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) — —
Pseudomonas sp. S08-1 0.39 OH686_10990 hypothetical protein 0.14 OH686_03575 SAM-dependent methyltransferase low > 80

Not shown: 8 genomes with orthologs for HGI48_RS17360 only; 13 genomes with orthologs for HGI48_RS16175 only