Conservation of cofitness between HER17_RS09565 and HER17_RS21160 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09565 YcjF family protein 1.0 HER17_RS21160 DNA-3-methyladenine glycosylase I 0.50 12
Escherichia coli ECRC100 0.75 OKFHMN_02310 ycjF UPF0283 membrane protein YcjF 0.72 OKFHMN_16040 tag DNA-3-methyladenine glycosylase I — —
Escherichia coli ECOR38 0.75 HEPCGN_25880 ycjF UPF0283 membrane protein YcjF 0.72 HEPCGN_14930 tag DNA-3-methyladenine glycosylase I low > 87
Escherichia coli ECRC99 0.75 KEDOAH_26465 ycjF UPF0283 membrane protein YcjF 0.72 KEDOAH_12110 tag DNA-3-methyladenine glycosylase I — —
Escherichia coli ECRC98 0.75 JDDGAC_04855 ycjF UPF0283 membrane protein YcjF 0.72 JDDGAC_19670 tag DNA-3-methyladenine glycosylase I low > 86
Escherichia coli ECRC102 0.75 NIAGMN_26480 ycjF UPF0283 membrane protein YcjF 0.72 NIAGMN_13800 tag DNA-3-methyladenine glycosylase I — —
Escherichia coli ECRC101 0.75 MCAODC_15960 ycjF UPF0283 membrane protein YcjF 0.71 MCAODC_06555 tag DNA-3-methyladenine glycosylase I low > 87
Escherichia coli BW25113 0.74 b1322 ycjF hypothetical protein (NCBI) 0.72 b3549 tag 3-methyl-adenine DNA glycosylase I, constitutive (NCBI) low > 76
Escherichia fergusonii Becca 0.74 EFB2_02605 hypothetical protein 0.73 EFB2_00258 DNA-3-methyladenine glycosylase 1 low > 86
Escherichia coli ECRC62 0.74 BNILDI_18155 ycjF UPF0283 membrane protein YcjF 0.72 BNILDI_03560 tag DNA-3-methyladenine glycosylase I low > 75
Escherichia coli ECOR27 0.74 NOLOHH_20005 ycjF UPF0283 membrane protein YcjF 0.72 NOLOHH_07985 tag DNA-3-methyladenine glycosylase I low > 75
Escherichia coli BL21 0.74 ECD_01299 UPF0283 family inner membrane protein 0.72 ECD_03399 3-methyl-adenine DNA glycosylase I, constitutive — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_02360 hypothetical protein 0.72 OHPLBJKB_00157 DNA-3-methyladenine glycosylase 1 low > 73
Escherichia coli Nissle 1917 0.74 ECOLIN_RS07940 YcjF family protein 0.73 ECOLIN_RS20310 DNA-3-methyladenine glycosylase I — —
Pantoea sp. MT58 0.74 IAI47_09420 TIGR01620 family protein 0.57 IAI47_00145 DNA-3-methyladenine glycosylase I low > 76
Serratia liquefaciens MT49 0.74 IAI46_13475 TIGR01620 family protein 0.70 IAI46_00120 DNA-3-methyladenine glycosylase I low > 86
Dickeya dadantii 3937 0.73 DDA3937_RS12405 TIGR01620 family protein 0.79 DDA3937_RS21070 DNA-3-methyladenine glycosylase I low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS12925 TIGR01620 family protein 0.82 DZA65_RS00205 DNA-3-methyladenine glycosylase I low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS12475 TIGR01620 family protein 0.83 HGI48_RS00200 DNA-3-methyladenine glycosylase I low > 71
Rahnella sp. WP5 0.70 EX31_RS15660 TIGR01620 family protein 0.68 EX31_RS05880 DNA-3-methyladenine glycosylase I low > 89
Enterobacter asburiae PDN3 0.70 EX28DRAFT_0993 TIGR01620 family protein 0.73 EX28DRAFT_3809 DNA-3-methyladenine glycosylase I (EC 3.2.2.20) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2680 Membrane protein YcjF 0.72 GFF463 DNA-3-methyladenine glycosylase (EC 3.2.2.20) low > 78
Erwinia tracheiphila SCR3 0.68 LU632_RS11535 YcjF family protein 0.67 LU632_RS00080 DNA-3-methyladenine glycosylase I low > 74
Klebsiella michiganensis M5al 0.67 BWI76_RS12480 TIGR01620 family protein 0.70 BWI76_RS26920 DNA-3-methyladenine glycosylase I low > 92
Enterobacter sp. TBS_079 0.67 MPMX20_02455 hypothetical protein 0.74 MPMX20_00185 DNA-3-methyladenine glycosylase 1 low > 85
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_06600 TIGR01620 family protein 0.50 CSW01_08405 DNA-3-methyladenine glycosylase I low > 62
Shewanella oneidensis MR-1 0.22 SO1811 conserved hypothetical protein (NCBI ptt file) 0.55 SO0016 tag DNA-3-methyladenine glycosidase I (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.22 Shew_2492 hypothetical protein (RefSeq) 0.59 Shew_0011 DNA-3-methyladenine glycosylase I (RefSeq) low > 60
Shewanella sp. ANA-3 0.21 Shewana3_2644 hypothetical protein (RefSeq) 0.54 Shewana3_0018 DNA-3-methyladenine glycosylase I (RefSeq) low > 73
Shewanella amazonensis SB2B 0.20 Sama_1241 hypothetical protein (RefSeq) 0.56 Sama_0027 DNA-3-methyladenine glycosylase I (RefSeq) low > 62
Agrobacterium fabrum C58 0.16 Atu1356 hypothetical protein 0.43 Atu0670 3-methyladenine-DNA glycosylase low > 89
Rhodopseudomonas palustris CGA009 0.14 TX73_008130 TIGR01620 family protein 0.52 TX73_005485 DNA-3-methyladenine glycosylase I low > 86
Bosea sp. OAE506 0.12 ABIE41_RS13235 TIGR01620 family protein 0.48 ABIE41_RS09690 DNA-3-methyladenine glycosylase I low > 77

Not shown: 0 genomes with orthologs for HER17_RS09565 only; 61 genomes with orthologs for HER17_RS21160 only