Conservation of cofitness between HER17_RS16300 and HER17_RS19990 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16300 sigma E protease regulator RseP 1.0 HER17_RS19990 outer membrane-stress sensor serine endopeptidase DegS 0.79 3
Dickeya dadantii 3937 0.81 DDA3937_RS05150 sigma E protease regulator RseP 0.65 DDA3937_RS01600 outer membrane-stress sensor serine endopeptidase DegS 0.82 2
Dickeya dianthicola 67-19 0.81 HGI48_RS05150 sigma E protease regulator RseP 0.65 HGI48_RS01515 outer membrane-stress sensor serine endopeptidase DegS 0.53 64
Serratia liquefaciens MT49 0.80 IAI46_20225 sigma E protease regulator RseP 0.58 IAI46_22395 outer membrane-stress sensor serine endopeptidase DegS — —
Dickeya dianthicola ME23 0.79 DZA65_RS05490 sigma E protease regulator RseP 0.65 DZA65_RS01580 outer membrane-stress sensor serine endopeptidase DegS 0.70 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF46 Intramembrane protease RasP/YluC, implicated in cell division based on FtsL cleavage 0.57 GFF2975 Outer membrane stress sensor protease DegS — —
Rahnella sp. WP5 0.79 EX31_RS13000 sigma E protease regulator RseP 0.61 EX31_RS12470 outer membrane-stress sensor serine endopeptidase DegS — —
Enterobacter asburiae PDN3 0.78 EX28DRAFT_3764 RIP metalloprotease RseP 0.55 EX28DRAFT_3284 periplasmic serine pepetdase DegS — —
Enterobacter sp. TBS_079 0.78 MPMX20_00860 Regulator of sigma-E protease RseP 0.58 MPMX20_04139 Serine endoprotease DegS — —
Klebsiella michiganensis M5al 0.77 BWI76_RS05250 zinc metallopeptidase RseP 0.57 BWI76_RS25370 outer membrane-stress sensor serine endopeptidase DegS — —
Pantoea sp. MT58 0.76 IAI47_15495 sigma E protease regulator RseP 0.59 IAI47_17265 outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECRC62 0.75 BNILDI_09150 rseP sigma E protease regulator RseP 0.58 BNILDI_01935 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03487 Regulator of sigma-E protease RseP 0.57 OHPLBJKB_00469 Serine endoprotease DegS — —
Escherichia fergusonii Becca 0.75 EFB2_03868 Regulator of sigma-E protease RseP 0.59 EFB2_00595 Serine endoprotease DegS — —
Escherichia coli BL21 0.75 ECD_00174 inner membrane zinc RIP metalloprotease; RpoE activator, by degrading RseA; cleaved signal peptide endoprotease 0.58 ECD_03095 serine endoprotease, periplasmic — —
Escherichia coli ECRC100 0.75 OKFHMN_10175 rseP sigma E protease regulator RseP 0.57 OKFHMN_17800 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECRC98 0.75 JDDGAC_13770 rseP sigma E protease regulator RseP 0.57 JDDGAC_21425 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECRC102 0.75 NIAGMN_08025 rseP sigma E protease regulator RseP 0.57 NIAGMN_15560 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli Nissle 1917 0.75 ECOLIN_RS00960 sigma E protease regulator RseP 0.59 ECOLIN_RS18550 outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECOR38 0.75 HEPCGN_08130 rseP sigma E protease regulator RseP 0.57 HEPCGN_16670 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli BW25113 0.75 b0176 yaeL zinc metallopeptidase (NCBI) 0.57 b3235 degS serine endoprotease, periplasmic (NCBI) — —
Escherichia coli ECOR27 0.75 NOLOHH_02520 rseP sigma E protease regulator RseP 0.57 NOLOHH_09600 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECRC99 0.75 KEDOAH_17980 rseP sigma E protease regulator RseP 0.57 KEDOAH_10350 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECRC101 0.75 MCAODC_00690 rseP sigma E protease regulator RseP 0.57 MCAODC_08320 degS outer membrane-stress sensor serine endopeptidase DegS — —
Erwinia tracheiphila SCR3 0.73 LU632_RS19930 rseP sigma E protease regulator RseP 0.53 LU632_RS21360 degS outer membrane-stress sensor serine endopeptidase DegS 0.95 2
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_11475 zinc metalloprotease 0.43 CSW01_03015 outer membrane-stress sensor serine endopeptidase DegS — —
Shewanella sp. ANA-3 0.55 Shewana3_2808 peptidase RseP (RefSeq) 0.37 Shewana3_0689 DegS serine peptidase (RefSeq) — —
Shewanella oneidensis MR-1 0.54 SO1636 membrane-associated zinc metalloprotease, putative (NCBI ptt file) 0.37 SO3943 degS protease DegS (NCBI ptt file) — —
Shewanella loihica PV-4 0.53 Shew_2628 putative membrane-associated zinc metalloprotease (RefSeq) 0.38 Shew_3297 periplasmic serine protease DegS (RefSeq) — —
Shewanella amazonensis SB2B 0.52 Sama_1146 membrane-associated zinc metalloprotease, putative (RefSeq) 0.36 Sama_3074 protease DegS (RefSeq) 0.81 1
Alteromonas macleodii MIT1002 0.51 MIT1002_01011 Regulator of sigma E protease 0.34 MIT1002_00841 Serine endoprotease DegS precursor — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS21620 RIP metalloprotease RseP 0.30 ABZR86_RS09885 trypsin-like peptidase domain-containing protein — —

Not shown: 52 genomes with orthologs for HER17_RS16300 only; 0 genomes with orthologs for HER17_RS19990 only