Conservation of cofitness between HER17_RS04200 and HER17_RS19990 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04200 7-carboxy-7-deazaguanine synthase QueE 1.0 HER17_RS19990 outer membrane-stress sensor serine endopeptidase DegS 0.66 11
Serratia liquefaciens MT49 0.86 IAI46_03675 7-carboxy-7-deazaguanine synthase QueE 0.58 IAI46_22395 outer membrane-stress sensor serine endopeptidase DegS — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF4831 Queuosine Biosynthesis QueE Radical SAM 0.57 GFF2975 Outer membrane stress sensor protease DegS — —
Dickeya dadantii 3937 0.86 DDA3937_RS16970 7-carboxy-7-deazaguanine synthase QueE 0.65 DDA3937_RS01600 outer membrane-stress sensor serine endopeptidase DegS low > 74
Escherichia coli ECRC99 0.85 KEDOAH_07830 queE 7-carboxy-7-deazaguanine synthase QueE 0.57 KEDOAH_10350 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli BL21 0.85 ECD_02622 7-carboxy-7-deazaguanine synthase; queosine biosynthesis 0.58 ECD_03095 serine endoprotease, periplasmic — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00957 7-carboxy-7-deazaguanine synthase 0.57 OHPLBJKB_00469 Serine endoprotease DegS — —
Escherichia coli ECRC62 0.85 BNILDI_10675 queE 7-carboxy-7-deazaguanine synthase QueE 0.58 BNILDI_01935 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli BW25113 0.85 b2777 ygcF hypothetical protein (NCBI) 0.57 b3235 degS serine endoprotease, periplasmic (NCBI) — —
Escherichia coli ECRC101 0.85 MCAODC_10825 queE 7-carboxy-7-deazaguanine synthase QueE 0.57 MCAODC_08320 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECRC102 0.85 NIAGMN_18070 queE 7-carboxy-7-deazaguanine synthase QueE 0.57 NIAGMN_15560 degS outer membrane-stress sensor serine endopeptidase DegS — —
Klebsiella michiganensis M5al 0.85 BWI76_RS22780 7-carboxy-7-deazaguanine synthase QueE 0.57 BWI76_RS25370 outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECRC100 0.85 OKFHMN_20300 queE 7-carboxy-7-deazaguanine synthase QueE 0.57 OKFHMN_17800 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECRC98 0.85 JDDGAC_23965 queE 7-carboxy-7-deazaguanine synthase QueE 0.57 JDDGAC_21425 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli ECOR27 0.85 NOLOHH_12170 queE 7-carboxy-7-deazaguanine synthase QueE 0.57 NOLOHH_09600 degS outer membrane-stress sensor serine endopeptidase DegS — —
Escherichia coli Nissle 1917 0.85 ECOLIN_RS15475 7-carboxy-7-deazaguanine synthase QueE 0.59 ECOLIN_RS18550 outer membrane-stress sensor serine endopeptidase DegS low > 55
Escherichia coli ECOR38 0.85 HEPCGN_19205 queE 7-carboxy-7-deazaguanine synthase QueE 0.57 HEPCGN_16670 degS outer membrane-stress sensor serine endopeptidase DegS low > 87
Escherichia fergusonii Becca 0.85 EFB2_01141 7-carboxy-7-deazaguanine synthase 0.59 EFB2_00595 Serine endoprotease DegS low > 86
Enterobacter sp. TBS_079 0.84 MPMX20_03645 7-carboxy-7-deazaguanine synthase 0.58 MPMX20_04139 Serine endoprotease DegS — —
Enterobacter asburiae PDN3 0.84 EX28DRAFT_2855 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 0.55 EX28DRAFT_3284 periplasmic serine pepetdase DegS — —
Erwinia tracheiphila SCR3 0.84 LU632_RS06390 queE 7-carboxy-7-deazaguanine synthase QueE 0.53 LU632_RS21360 degS outer membrane-stress sensor serine endopeptidase DegS low > 74
Rahnella sp. WP5 0.83 EX31_RS07920 7-carboxy-7-deazaguanine synthase QueE 0.61 EX31_RS12470 outer membrane-stress sensor serine endopeptidase DegS — —
Pantoea sp. MT58 0.80 IAI47_04140 7-carboxy-7-deazaguanine synthase QueE 0.59 IAI47_17265 outer membrane-stress sensor serine endopeptidase DegS — —
Dickeya dianthicola 67-19 0.79 HGI48_RS17035 7-carboxy-7-deazaguanine synthase QueE 0.65 HGI48_RS01515 outer membrane-stress sensor serine endopeptidase DegS low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS18110 7-carboxy-7-deazaguanine synthase QueE 0.65 DZA65_RS01580 outer membrane-stress sensor serine endopeptidase DegS low > 75
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_06870 7-carboxy-7-deazaguanine synthase QueE 0.43 CSW01_03015 outer membrane-stress sensor serine endopeptidase DegS — —
Shewanella sp. ANA-3 0.61 Shewana3_2163 radical activating enzyme (RefSeq) 0.37 Shewana3_0689 DegS serine peptidase (RefSeq) low > 73
Shewanella loihica PV-4 0.61 Shew_2061 radical SAM domain-containing protein (RefSeq) 0.38 Shew_3297 periplasmic serine protease DegS (RefSeq) low > 60
Shewanella oneidensis MR-1 0.60 SO2501 radical activating enzyme (NCBI ptt file) 0.37 SO3943 degS protease DegS (NCBI ptt file) 0.31 58
Shewanella amazonensis SB2B 0.58 Sama_1825 radical activating enzyme (RefSeq) 0.36 Sama_3074 protease DegS (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.58 MIT1002_01264 7-carboxy-7-deazaguanine synthase 0.34 MIT1002_00841 Serine endoprotease DegS precursor — —
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS10790 7-carboxy-7-deazaguanine synthase QueE 0.30 ABZR86_RS09885 trypsin-like peptidase domain-containing protein low > 74

Not shown: 52 genomes with orthologs for HER17_RS04200 only; 0 genomes with orthologs for HER17_RS19990 only