Conservation of cofitness between HER17_RS00910 and HER17_RS19690 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00910 cystathionine gamma-synthase 1.0 HER17_RS19690 cystathionine beta-lyase 0.98 10
Dickeya dianthicola 67-19 0.92 HGI48_RS20425 cystathionine gamma-synthase 0.85 HGI48_RS01710 cystathionine beta-lyase 0.91 8
Dickeya dadantii 3937 0.92 DDA3937_RS00950 cystathionine gamma-synthase 0.85 DDA3937_RS01815 cystathionine beta-lyase 0.96 8
Dickeya dianthicola ME23 0.92 DZA65_RS21470 cystathionine gamma-synthase 0.85 DZA65_RS01785 cystathionine beta-lyase 0.95 6
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04111 Cystathionine gamma-synthase 0.78 OHPLBJKB_00693 Cystathionine beta-lyase MetC low > 73
Klebsiella michiganensis M5al 0.87 BWI76_RS00785 cystathionine gamma-synthase 0.77 BWI76_RS24285 cystathionine beta-lyase 0.93 6
Escherichia coli ECOR27 0.87 NOLOHH_05820 metB cystathionine gamma-synthase 0.78 NOLOHH_10735 metC cystathionine beta-lyase 0.96 6
Escherichia coli ECRC62 0.87 BNILDI_05715 metB cystathionine gamma-synthase 0.78 BNILDI_00780 metC cystathionine beta-lyase 0.98 7
Escherichia coli BW25113 0.87 b3939 metB cystathionine gamma-synthase (NCBI) 0.77 b3008 metC cystathionine beta-lyase (NCBI) 0.95 2
Escherichia coli Nissle 1917 0.87 ECOLIN_RS22725 cystathionine gamma-synthase 0.78 ECOLIN_RS17315 cystathionine beta-lyase 0.95 11
Escherichia coli BL21 0.87 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.77 ECD_02881 cystathionine beta-lyase, PLP-dependent 0.85 25
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.77 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.95 6
Escherichia coli ECOR38 0.87 HEPCGN_12345 metB cystathionine gamma-synthase 0.77 HEPCGN_17825 metC cystathionine beta-lyase 0.96 10
Escherichia fergusonii Becca 0.87 EFB2_04679 Cystathionine gamma-synthase 0.77 EFB2_00802 Cystathionine beta-lyase MetC low > 86
Escherichia coli ECRC99 0.87 KEDOAH_14485 metB cystathionine gamma-synthase 0.77 KEDOAH_09185 metC cystathionine beta-lyase — —
Escherichia coli ECRC98 0.87 JDDGAC_17300 metB cystathionine gamma-synthase 0.77 JDDGAC_22595 metC cystathionine beta-lyase 0.99 7
Escherichia coli ECRC102 0.87 NIAGMN_11430 metB cystathionine gamma-synthase 0.77 NIAGMN_16725 metC cystathionine beta-lyase — —
Escherichia coli ECRC100 0.87 OKFHMN_13675 metB cystathionine gamma-synthase 0.77 OKFHMN_18960 metC cystathionine beta-lyase 0.98 25
Escherichia coli ECRC101 0.87 MCAODC_04175 metB cystathionine gamma-synthase 0.77 MCAODC_09475 metC cystathionine beta-lyase 0.99 1
Enterobacter sp. TBS_079 0.87 MPMX20_04531 Cystathionine gamma-synthase 0.78 MPMX20_03852 Cystathionine beta-lyase MetC 0.96 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) 0.77 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) low > 78
Erwinia tracheiphila SCR3 0.85 LU632_RS19640 metB cystathionine gamma-synthase 0.73 LU632_RS20545 metC cystathionine beta-lyase 0.96 1
Serratia liquefaciens MT49 0.84 IAI46_24540 cystathionine gamma-synthase 0.82 IAI46_21725 cystathionine beta-lyase 0.50 15
Pantoea sp. MT58 0.79 IAI47_00880 cystathionine gamma-synthase 0.73 IAI47_03215 cystathionine beta-lyase low > 76
Rahnella sp. WP5 0.77 EX31_RS14215 cystathionine gamma-synthase 0.81 EX31_RS08025 cystathionine beta-lyase low > 89
Shewanella amazonensis SB2B 0.61 Sama_3171 cystathionine gamma-synthase (RefSeq) 0.53 Sama_2008 cystathionine beta-lyase (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.65 CSW01_08400 cystathionine beta-lyase low > 62
Shewanella loihica PV-4 0.60 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) 0.56 Shew_1789 cystathionine beta-lyase (RefSeq) 0.96 29
Shewanella sp. ANA-3 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) 0.54 Shewana3_2414 cystathionine beta-lyase (RefSeq) 0.93 19
Shewanella oneidensis MR-1 0.58 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) 0.54 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.98 3
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS16160 cystathionine gamma-synthase 0.29 A4249_RS05585 cystathionine beta-lyase low > 48
Sinorhizobium meliloti 1021 0.50 SMc02595 cystathionine gamma-synthase 0.39 SMc02117 cystathionine beta-lyase 0.31 1
Acinetobacter radioresistens SK82 0.34 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.22 MPMX26_02724 Cystathionine beta-lyase low > 36
Variovorax sp. OAS795 0.30 ABID97_RS21630 O-succinylhomoserine sulfhydrylase 0.34 ABID97_RS22430 cystathionine beta-lyase — —

Not shown: 8 genomes with orthologs for HER17_RS00910 only; 28 genomes with orthologs for HER17_RS19690 only