Conservation of cofitness between HER17_RS02010 and HER17_RS16000 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02010 transcriptional regulator 1.0 HER17_RS16000 ACP phosphodiesterase 0.51 10
Dickeya dadantii 3937 0.93 DDA3937_RS19340 transcriptional regulator 0.78 DDA3937_RS05460 DUF479 domain-containing protein low > 74
Dickeya dianthicola 67-19 0.92 HGI48_RS19440 transcriptional regulator 0.79 HGI48_RS05520 DUF479 domain-containing protein low > 71
Dickeya dianthicola ME23 0.92 DZA65_RS20560 transcriptional regulator 0.79 DZA65_RS05845 DUF479 domain-containing protein low > 75
Rahnella sp. WP5 0.92 EX31_RS04470 transcriptional regulator 0.71 EX31_RS22085 DUF479 domain-containing protein low > 89
Serratia liquefaciens MT49 0.91 IAI46_23490 transcriptional regulator 0.71 IAI46_04830 DUF479 domain-containing protein low > 86
Escherichia coli ECRC100 0.89 OKFHMN_17300 yheO Uncharacterized protein YheO 0.56 OKFHMN_08515 acpH ACP phosphodiesterase low > 80
Escherichia coli ECRC99 0.89 KEDOAH_10840 yheO Uncharacterized protein YheO 0.56 KEDOAH_19450 acpH ACP phosphodiesterase — —
Escherichia coli ECRC101 0.89 MCAODC_07830 yheO Uncharacterized protein YheO 0.56 MCAODC_27740 acpH ACP phosphodiesterase low > 87
Escherichia coli ECRC98 0.89 JDDGAC_20930 yheO Uncharacterized protein YheO 0.56 JDDGAC_12170 acpH ACP phosphodiesterase low > 86
Escherichia coli ECRC102 0.89 NIAGMN_15070 yheO Uncharacterized protein YheO 0.56 NIAGMN_06570 acpH ACP phosphodiesterase — —
Escherichia coli ECOR27 0.89 NOLOHH_09100 yheO Uncharacterized protein YheO 0.56 NOLOHH_01450 acpH ACP phosphodiesterase low > 75
Escherichia coli ECRC62 0.89 BNILDI_02420 yheO Uncharacterized protein YheO 0.56 BNILDI_22865 acpH ACP phosphodiesterase low > 75
Escherichia coli Nissle 1917 0.89 ECOLIN_RS19165 transcriptional regulator 0.56 ECOLIN_RS02435 ACP phosphodiesterase low > 55
Escherichia coli BW25113 0.89 b3346 yheO orf, hypothetical protein (VIMSS) 0.56 b0404 yajB hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.89 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.56 ECD_00352 acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase low > 61
Escherichia fergusonii Becca 0.89 EFB2_00477 Transcriptional regulator DauR 0.57 EFB2_03653 Acyl carrier protein phosphodiesterase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.89 OHPLBJKB_00357 Transcriptional regulator DauR 0.56 OHPLBJKB_03272 Acyl carrier protein phosphodiesterase 0.32 59
Escherichia coli ECOR38 0.88 HEPCGN_16130 yheO Uncharacterized protein YheO 0.56 HEPCGN_07155 acpH ACP phosphodiesterase low > 87
Klebsiella michiganensis M5al 0.88 BWI76_RS25905 hypothetical protein 0.52 BWI76_RS06290 ACP phosphodiesterase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3726 YheO-like PAS domain 0.54 GFF4303 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) low > 78
Enterobacter sp. TBS_079 0.88 MPMX20_04239 Transcriptional regulator DauR 0.57 MPMX20_00995 Acyl carrier protein phosphodiesterase low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria 0.56 EX28DRAFT_2567 Uncharacterized protein conserved in bacteria low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS22710 transcriptional regulator 0.48 LU632_RS18480 ACP phosphodiesterase low > 74
Pantoea sp. MT58 0.86 IAI47_02055 transcriptional regulator 0.55 IAI47_14815 DUF479 domain-containing protein low > 76
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_01875 hypothetical protein 0.40 CSW01_18025 ACP phosphodiesterase low > 62
Shewanella oneidensis MR-1 0.34 SO1402 conserved hypothetical protein (NCBI ptt file) 0.17 SO3116 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.34 Shewana3_2973 YheO domain-containing protein (RefSeq) 0.16 Shewana3_1432 hypothetical protein (RefSeq) low > 73
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_923 YheO-like PAS domain 0.28 Pf1N1B4_3253 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) low > 87
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_04640 hypothetical protein 0.28 AO353_24400 ACP phosphodiesterase low > 101
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_5396 YheO-like PAS domain 0.27 Pf6N2E2_2817 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) low > 103
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_1693 YheO-like PAS domain 0.28 PfGW456L13_4575 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) low > 87
Pseudomonas sp. RS175 0.12 PFR28_03547 Transcriptional regulator DauR 0.28 PFR28_00638 Acyl carrier protein phosphodiesterase low > 88

Not shown: 3 genomes with orthologs for HER17_RS02010 only; 19 genomes with orthologs for HER17_RS16000 only