Conservation of cofitness between HER17_RS17275 and HER17_RS14940 in Pectobacterium carotovorum WPP14

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS17275 tryptophan permease 1.0 HER17_RS14940 succinate dehydrogenase flavoprotein subunit 0.89 7
Rahnella sp. WP5 0.70 EX31_RS01105 tryptophan permease 0.90 EX31_RS23430 succinate dehydrogenase flavoprotein subunit low > 89
Klebsiella michiganensis M5al 0.69 BWI76_RS03530 tryptophan permease 0.90 BWI76_RS08405 succinate dehydrogenase flavoprotein subunit low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF1505 Tryptophan-specific transport protein 0.90 GFF4637 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) low > 78
Escherichia coli BL21 0.69 ECD_03028 tryptophan transporter of high affinity 0.90 ECD_00683 succinate dehydrogenase, flavoprotein subunit low > 61
Escherichia coli Nissle 1917 0.69 ECOLIN_RS18155 tryptophan permease 0.90 ECOLIN_RS03855 succinate dehydrogenase flavoprotein subunit low > 55
Escherichia coli BW25113 0.69 b3161 mtr tryptophan transporter of high affinity (NCBI) 0.90 b0723 sdhA succinate dehydrogenase flavoprotein subunit (NCBI) low > 76
Escherichia coli ECRC62 0.69 BNILDI_01575 mtr tryptophan permease 0.90 BNILDI_21320 sdhA succinate dehydrogenase flavoprotein subunit low > 75
Escherichia coli ECOR38 0.69 HEPCGN_17035 mtr tryptophan permease 0.90 HEPCGN_01295 sdhA succinate dehydrogenase flavoprotein subunit low > 87
Escherichia coli ECOR27 0.69 NOLOHH_09960 mtr tryptophan permease 0.90 NOLOHH_23325 sdhA succinate dehydrogenase flavoprotein subunit low > 75
Escherichia fergusonii Becca 0.69 EFB2_00662 Tryptophan-specific transport protein 0.90 EFB2_03382 Succinate dehydrogenase flavoprotein subunit low > 86
Enterobacter sp. TBS_079 0.69 MPMX20_04065 Tryptophan-specific transport protein 0.90 MPMX20_01352 Succinate dehydrogenase flavoprotein subunit low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_00539 Tryptophan-specific transport protein 0.90 OHPLBJKB_02993 Succinate dehydrogenase flavoprotein subunit low > 73
Escherichia coli ECRC102 0.68 NIAGMN_15920 mtr tryptophan permease 0.90 NIAGMN_04990 sdhA succinate dehydrogenase flavoprotein subunit — —
Escherichia coli ECRC101 0.68 MCAODC_08680 mtr tryptophan permease 0.90 MCAODC_26160 sdhA succinate dehydrogenase flavoprotein subunit low > 87
Escherichia coli ECRC98 0.68 JDDGAC_21785 mtr tryptophan permease 0.90 JDDGAC_10595 sdhA succinate dehydrogenase flavoprotein subunit low > 86
Enterobacter asburiae PDN3 0.68 EX28DRAFT_3210 aromatic amino acid transport protein 0.90 EX28DRAFT_2268 succinate dehydrogenase subunit A (EC 1.3.5.1) low > 76
Escherichia coli ECRC99 0.68 KEDOAH_09990 mtr tryptophan permease 0.90 KEDOAH_21025 sdhA succinate dehydrogenase flavoprotein subunit — —
Escherichia coli ECRC100 0.68 OKFHMN_18160 mtr tryptophan permease 0.90 OKFHMN_06940 sdhA succinate dehydrogenase flavoprotein subunit low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU2205 mtr tryptophan-specific transport protein (TIGR) 0.28 DVU3262 fdrA fumarate reductase, flavoprotein subunit (TIGR) low > 55
Serratia liquefaciens MT49 0.51 IAI46_17270 tryptophan permease 0.92 IAI46_06265 succinate dehydrogenase flavoprotein subunit low > 86
Shewanella sp. ANA-3 0.51 Shewana3_3987 aromatic amino acid transporter (RefSeq) 0.77 Shewana3_1708 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Shewanella oneidensis MR-1 0.50 SO4601 mtr tryptophan-specific transport protein (NCBI ptt file) 0.77 SO1928 sdhA succinate dehydrogenase, flavoprotein subunit (NCBI ptt file) — —
Shewanella loihica PV-4 0.49 Shew_3531 aromatic amino acid transporter (RefSeq) 0.76 Shew_1653 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Shewanella amazonensis SB2B 0.47 Sama_3479 aromatic amino acid transport protein (RefSeq) 0.77 Sama_1425 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) — —
Pantoea sp. MT58 0.36 IAI47_21075 tryptophan permease 0.88 IAI47_13755 succinate dehydrogenase flavoprotein subunit low > 76
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_14800 transposase 0.82 CSW01_10440 succinate dehydrogenase flavoprotein subunit low > 62

Not shown: 0 genomes with orthologs for HER17_RS17275 only; 60 genomes with orthologs for HER17_RS14940 only