Conservation of cofitness between HER17_RS13490 and HER17_RS14885 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS13490 NAD-dependent malic enzyme 1.0 HER17_RS14885 tol-pal system-associated acyl-CoA thioesterase 0.64 17
Dickeya dianthicola 67-19 0.89 HGI48_RS08645 NAD-dependent malic enzyme 0.84 HGI48_RS06540 tol-pal system-associated acyl-CoA thioesterase low > 71
Dickeya dianthicola ME23 0.89 DZA65_RS08935 NAD-dependent malic enzyme 0.86 DZA65_RS06890 tol-pal system-associated acyl-CoA thioesterase low > 75
Dickeya dadantii 3937 0.89 DDA3937_RS08480 NAD-dependent malic enzyme 0.85 DDA3937_RS06495 tol-pal system-associated acyl-CoA thioesterase low > 74
Serratia liquefaciens MT49 0.88 IAI46_07935 NAD-dependent malic enzyme 0.87 IAI46_06315 tol-pal system-associated acyl-CoA thioesterase low > 86
Rahnella sp. WP5 0.86 EX31_RS18665 NAD-dependent malic enzyme 0.91 EX31_RS23475 tol-pal system-associated acyl-CoA thioesterase low > 89
Pantoea sp. MT58 0.82 IAI47_06755 NAD-dependent malic enzyme 0.77 IAI47_13705 tol-pal system-associated acyl-CoA thioesterase low > 76
Erwinia tracheiphila SCR3 0.78 LU632_RS08550 NAD-dependent malic enzyme 0.76 LU632_RS16050 ybgC tol-pal system-associated acyl-CoA thioesterase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2556 NAD-dependent malic enzyme (EC 1.1.1.38) 0.62 GFF4650 4-hydroxybenzoyl-CoA thioesterase family active site low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02238 NAD-dependent malic enzyme 0.78 OHPLBJKB_02977 Acyl-CoA thioester hydrolase YbgC low > 73
Escherichia coli ECOR27 0.77 NOLOHH_19035 maeA malate dehydrogenase 0.77 NOLOHH_23260 ybgC tol-pal system-associated acyl-CoA thioesterase low > 75
Escherichia coli BL21 0.77 ECD_01437 malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme 0.78 ECD_00696 acyl-CoA thioester hydrolase — —
Escherichia coli ECRC62 0.77 BNILDI_17520 maeA malate dehydrogenase 0.77 BNILDI_21255 ybgC tol-pal system-associated acyl-CoA thioesterase low > 75
Escherichia coli BW25113 0.77 b1479 sfcA NAD-linked malate dehydrogenase (malic enzyme) (VIMSS) 0.78 b0736 ybgC predicted acyl-CoA thioesterase (NCBI) low > 76
Enterobacter asburiae PDN3 0.77 EX28DRAFT_1103 Malic enzyme 0.76 EX28DRAFT_2255 tol-pal system-associated acyl-CoA thioesterase low > 76
Escherichia fergusonii Becca 0.77 EFB2_02512 NAD-dependent malic enzyme 0.78 EFB2_03370 Acyl-CoA thioester hydrolase YbgC low > 86
Escherichia coli ECOR38 0.77 HEPCGN_26435 maeA malate dehydrogenase 0.77 HEPCGN_01445 ybgC tol-pal system-associated acyl-CoA thioesterase low > 87
Enterobacter sp. TBS_079 0.77 MPMX20_02369 NAD-dependent malic enzyme 0.77 MPMX20_01365 Acyl-CoA thioester hydrolase YbgC low > 85
Escherichia coli Nissle 1917 0.77 ECOLIN_RS08525 malate dehydrogenase 0.78 ECOLIN_RS03920 tol-pal system-associated acyl-CoA thioesterase — —
Klebsiella michiganensis M5al 0.77 BWI76_RS13830 NAD-dependent malic enzyme 0.75 BWI76_RS08515 acyl-CoA thioesterase YbgC low > 92
Escherichia coli ECRC100 0.77 OKFHMN_01360 maeA malate dehydrogenase 0.77 OKFHMN_06825 ybgC tol-pal system-associated acyl-CoA thioesterase low > 80
Escherichia coli ECRC98 0.77 JDDGAC_03850 maeA malate dehydrogenase 0.77 JDDGAC_10480 ybgC tol-pal system-associated acyl-CoA thioesterase low > 86
Escherichia coli ECRC99 0.77 KEDOAH_27080 maeA malate dehydrogenase 0.77 KEDOAH_21140 ybgC tol-pal system-associated acyl-CoA thioesterase — —
Escherichia coli ECRC101 0.77 MCAODC_16580 maeA malate dehydrogenase 0.77 MCAODC_26045 ybgC tol-pal system-associated acyl-CoA thioesterase low > 87
Escherichia coli ECRC102 0.77 NIAGMN_25490 maeA malate dehydrogenase 0.77 NIAGMN_04875 ybgC tol-pal system-associated acyl-CoA thioesterase — —
Acinetobacter radioresistens SK82 0.72 MPMX26_00080 NAD-dependent malic enzyme 0.33 MPMX26_02190 Acyl-CoA thioesterase YbgC — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_06015 NAD-dependent malic enzyme 0.55 CSW01_09215 tol-pal system-associated acyl-CoA thioesterase low > 62
Shewanella sp. ANA-3 0.69 Shewana3_0750 malate dehydrogenase (RefSeq) 0.47 Shewana3_2535 4-hydroxybenzoyl-CoA thioesterase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO3855 sfcA malate oxidoreductase (NCBI ptt file) 0.46 SO2752 conserved hypothetical protein TIGR00051 (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.69 Sama_2621 malate dehydrogenase (RefSeq) 0.45 Sama_2090 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.68 Shew_2962 malate dehydrogenase (RefSeq) 0.48 Shew_1523 4-hydroxybenzoyl-CoA thioesterase (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_1561 NAD-dependent malic enzyme 0.40 Psyr_1411 4-hydroxybenzoyl-CoA thioesterase low > 86
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_1561 NAD-dependent malic enzyme 0.40 Psyr_1411 4-hydroxybenzoyl-CoA thioesterase low > 86
Alteromonas macleodii MIT1002 0.64 MIT1002_00455 NAD-dependent malic enzyme 0.47 MIT1002_01334 Acyl-CoA thioester hydrolase YbgC low > 70
Ralstonia solanacearum PSI07 0.35 RPSI07_RS13995 NAD-dependent malic enzyme 0.41 RPSI07_RS20320 tol-pal system-associated acyl-CoA thioesterase low > 81

Not shown: 3 genomes with orthologs for HER17_RS13490 only; 49 genomes with orthologs for HER17_RS14885 only