Conservation of cofitness between HER17_RS07710 and HER17_RS13505 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS07710 UvrY/SirA/GacA family response regulator transcription factor 1.0 HER17_RS13505 glutathione ABC transporter substrate-binding protein GsiB 0.87 2
Serratia liquefaciens MT49 0.88 IAI46_09205 UvrY/SirA/GacA family response regulator transcription factor 0.80 IAI46_07850 glutathione ABC transporter substrate-binding protein GsiB low > 86
Rahnella sp. WP5 0.87 EX31_RS24145 UvrY/SirA/GacA family response regulator transcription factor 0.77 EX31_RS18735 glutathione ABC transporter substrate-binding protein GsiB low > 89
Pantoea sp. MT58 0.86 IAI47_12470 UvrY/SirA/GacA family response regulator transcription factor 0.78 IAI47_13125 glutathione ABC transporter substrate-binding protein GsiB low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1699 BarA-associated response regulator UvrY (= GacA = SirA) 0.77 GFF728 Dipeptide transport system, periplasmic component in protein degradation cluster 0.68 19
Escherichia coli BW25113 0.84 b1914 uvrY response regulator (NCBI) 0.76 b0830 yliB predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) 0.36 2
Escherichia fergusonii Becca 0.84 EFB2_02032 Response regulator UvrY 0.76 EFB2_03276 Glutathione-binding protein GsiB 0.58 38
Escherichia coli Nissle 1917 0.84 ECOLIN_RS10900 UvrY/SirA/GacA family response regulator transcription factor 0.76 ECOLIN_RS04415 glutathione ABC transporter substrate-binding protein GsiB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01815 Response regulator UvrY 0.76 OHPLBJKB_02882 Glutathione-binding protein GsiB low > 73
Escherichia coli ECOR27 0.84 NOLOHH_16440 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.76 NOLOHH_22455 gsiB glutathione ABC transporter substrate-binding protein GsiB low > 75
Escherichia coli ECRC102 0.84 NIAGMN_02230 uvrC excinuclease ABC subunit UvrC 0.76 NIAGMN_04140 gsiB glutathione ABC transporter substrate-binding protein GsiB — —
Escherichia coli ECRC99 0.84 KEDOAH_02270 uvrC excinuclease ABC subunit UvrC 0.76 KEDOAH_21815 gsiB glutathione ABC transporter substrate-binding protein GsiB — —
Escherichia coli ECOR38 0.84 HEPCGN_04175 uvrC excinuclease ABC subunit UvrC 0.76 HEPCGN_01935 gsiB glutathione ABC transporter substrate-binding protein GsiB low > 87
Escherichia coli ECRC101 0.84 MCAODC_19570 uvrC excinuclease ABC subunit UvrC 0.76 MCAODC_25310 gsiB glutathione ABC transporter substrate-binding protein GsiB low > 87
Escherichia coli ECRC98 0.84 JDDGAC_00410 uvrC excinuclease ABC subunit UvrC 0.76 JDDGAC_09730 gsiB glutathione ABC transporter substrate-binding protein GsiB low > 86
Escherichia coli ECRC100 0.84 OKFHMN_25820 uvrC excinuclease ABC subunit UvrC 0.76 OKFHMN_06095 gsiB glutathione ABC transporter substrate-binding protein GsiB low > 80
Escherichia coli ECRC62 0.84 BNILDI_15230 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.76 BNILDI_20730 gsiB glutathione ABC transporter substrate-binding protein GsiB low > 75
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0633 two component transcriptional regulator, LuxR family 0.76 EX28DRAFT_2134 ABC-type dipeptide transport system, periplasmic component low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_02839 Response regulator UvrY 0.76 MPMX20_01470 Glutathione-binding protein GsiB 0.52 4
Erwinia tracheiphila SCR3 0.83 LU632_RS10190 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.72 LU632_RS09560 gsiB glutathione ABC transporter substrate-binding protein GsiB — —
Klebsiella michiganensis M5al 0.82 BWI76_RS18335 DNA-binding response regulator 0.78 BWI76_RS09100 glutathione ABC transporter substrate-binding protein GsiB 0.36 13
Ralstonia solanacearum GMI1000 0.38 RS_RS01435 DNA-binding response regulator 0.67 RS_RS06920 glutathione ABC transporter substrate-binding protein GsiB low > 80
Ralstonia solanacearum PSI07 0.38 RPSI07_RS22720 DNA-binding response regulator 0.67 RPSI07_RS17235 glutathione ABC transporter substrate-binding protein GsiB low > 81
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS10600 DNA-binding response regulator 0.67 RALBFv3_RS00245 glutathione ABC transporter substrate-binding protein GsiB low > 76
Ralstonia solanacearum UW163 0.38 UW163_RS02980 DNA-binding response regulator 0.67 UW163_RS13575 glutathione ABC transporter substrate-binding protein GsiB — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS06400 response regulator transcription factor 0.67 ABZR87_RS11710 glutathione ABC transporter substrate-binding protein GsiB low > 80
Variovorax sp. SCN45 0.37 GFF2564 Two-component transcriptional response regulator, LuxR family 0.55 GFF1214 Oligopeptide transport substrate-binding protein @ Glutathione ABC transporter, substrate-binding protein GsiB low > 127
Variovorax sp. OAS795 0.37 ABID97_RS07360 response regulator transcription factor 0.54 ABID97_RS15405 glutathione ABC transporter substrate-binding protein GsiB low > 91
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS00785 LuxR family transcriptional regulator 0.64 RR42_RS11990 glutathione ABC transporter substrate-binding protein low > 128
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS13890 LuxR family transcriptional regulator 0.62 HSERO_RS09195 glutathione ABC transporter substrate-binding protein GsiB low > 78
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS13150 hisitidine kinase 0.66 BPHYT_RS15535 glutathione ABC transporter substrate-binding protein GsiB — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS05525 response regulator transcription factor 0.65 QEN71_RS16860 glutathione ABC transporter substrate-binding protein GsiB low > 153
Rhizobium sp. OAE497 0.26 ABIE40_RS23610 response regulator transcription factor 0.18 ABIE40_RS20600 ABC transporter substrate-binding protein low > 107
Azospirillum sp. SherDot2 0.26 MPMX19_03688 Response regulator UvrY 0.46 MPMX19_04005 Glutathione-binding protein GsiB low > 112

Not shown: 47 genomes with orthologs for HER17_RS07710 only; 9 genomes with orthologs for HER17_RS13505 only