Conservation of cofitness between HER17_RS11645 and HER17_RS12400 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11645 two-component system sensor histidine kinase PhoQ 1.0 HER17_RS12400 ATP-dependent Clp protease ATP-binding subunit ClpA 0.91 11
Dickeya dadantii 3937 0.77 DDA3937_RS11505 two-component system sensor histidine kinase PhoQ 0.94 DDA3937_RS09560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS11550 two-component system sensor histidine kinase PhoQ 0.94 HGI48_RS09575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS11885 two-component system sensor histidine kinase PhoQ 0.94 DZA65_RS09885 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Serratia liquefaciens MT49 0.68 IAI46_10390 two-component system sensor histidine kinase PhoQ 0.93 IAI46_08515 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Rahnella sp. WP5 0.67 EX31_RS24555 two-component system sensor histidine kinase PhoQ 0.92 EX31_RS18560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 89
Pantoea sp. MT58 0.64 IAI47_11935 two-component system sensor histidine kinase PhoQ 0.91 IAI47_12945 ATP-dependent Clp protease ATP-binding subunit ClpA low > 76
Erwinia tracheiphila SCR3 0.63 LU632_RS14595 phoQ two-component system sensor histidine kinase PhoQ 0.88 LU632_RS09705 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3414 Sensor protein PhoQ (EC 2.7.13.3) 0.91 GFF4901 ATP-dependent Clp protease ATP-binding subunit ClpA low > 78
Escherichia coli BL21 0.61 ECD_01127 sensory histidine kinase in two-component regulatory system with PhoP 0.91 ECD_00887 ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity — —
Escherichia fergusonii Becca 0.61 EFB2_02846 Sensor protein PhoQ 0.92 EFB2_03179 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_02539 Sensor protein PhoQ 0.92 OHPLBJKB_02786 ATP-dependent Clp protease ATP-binding subunit ClpA 0.49 67
Escherichia coli ECRC62 0.61 BNILDI_19085 phoQ two-component system sensor histidine kinase PhoQ 0.92 BNILDI_20435 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Escherichia coli Nissle 1917 0.61 ECOLIN_RS06605 two-component system sensor histidine kinase PhoQ 0.92 ECOLIN_RS04695 ATP-dependent Clp protease ATP-binding subunit ClpA low > 55
Escherichia coli ECOR27 0.61 NOLOHH_20920 phoQ two-component system sensor histidine kinase PhoQ 0.92 NOLOHH_22180 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Escherichia coli BW25113 0.61 b1129 phoQ sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) 0.92 b0882 clpA ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) low > 76
Escherichia coli ECOR38 0.61 HEPCGN_24195 phoQ two-component system sensor histidine kinase PhoQ 0.92 HEPCGN_22900 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1801 Signal transduction histidine kinase 0.91 EX28DRAFT_2050 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) 0.78 3
Escherichia coli ECRC100 0.61 OKFHMN_00725 phoQ two-component system sensor histidine kinase PhoQ 0.92 OKFHMN_05785 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Escherichia coli ECRC98 0.61 JDDGAC_06640 phoQ two-component system sensor histidine kinase PhoQ 0.92 JDDGAC_09420 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli ECRC101 0.61 MCAODC_22360 phoQ two-component system sensor histidine kinase PhoQ 0.92 MCAODC_25000 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Escherichia coli ECRC102 0.61 NIAGMN_24870 phoQ two-component system sensor histidine kinase PhoQ 0.92 NIAGMN_03825 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECRC99 0.61 KEDOAH_24810 phoQ two-component system sensor histidine kinase PhoQ 0.92 KEDOAH_22125 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Klebsiella michiganensis M5al 0.60 BWI76_RS11275 sensor protein PhoQ 0.91 BWI76_RS09615 ATP-dependent Clp protease ATP-binding subunit ClpA low > 92
Enterobacter sp. TBS_079 0.60 MPMX20_01810 Virulence sensor histidine kinase PhoQ 0.91 MPMX20_01544 ATP-dependent Clp protease ATP-binding subunit ClpA low > 85
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3484 Sensor protein PhoQ (EC 2.7.13.3) 0.65 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_2012 Sensor protein PhoQ (EC 2.7.13.3) 0.65 PfGW456L13_2646 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_02810 histidine kinase 0.65 AO353_27675 ATP-dependent Clp protease ATP-binding subunit ClpA low > 101
Pseudomonas sp. RS175 0.22 PFR28_03243 Virulence sensor histidine kinase PhoQ 0.66 PFR28_02613 ATP-dependent Clp protease ATP-binding subunit ClpA low > 88
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5705 Sensor protein PhoQ (EC 2.7.13.3) 0.65 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_18970 histidine kinase 0.65 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA 0.32 54
Pseudomonas stutzeri RCH2 0.21 Psest_3884 Signal transduction histidine kinase 0.65 Psest_2027 ATP-dependent Clp protease ATP-binding subunit clpA low > 67
Pseudomonas putida KT2440 0.20 PP_1187 sensor protein 0.65 PP_4008 ATP-dependent serine protease 0.31 14
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS23125 HAMP domain-containing protein 0.65 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas fluorescens SBW25 0.18 PFLU_RS23125 HAMP domain-containing protein 0.65 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas simiae WCS417 0.18 PS417_21510 histidine kinase 0.66 PS417_16510 Clp protease ClpX low > 88

Not shown: 0 genomes with orthologs for HER17_RS11645 only; 53 genomes with orthologs for HER17_RS12400 only