| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS21560 | | response regulator | 1.0 | HER17_RS12045 | | L,D-transpeptidase | 0.56 | 20 |
| Dickeya dianthicola 67-19 | 0.82 | HGI48_RS21345 | | response regulator | 0.69 | HGI48_RS13005 | | L,D-transpeptidase | low | > 71 |
| Dickeya dianthicola ME23 | 0.81 | DZA65_RS22325 | | response regulator | 0.69 | DZA65_RS13465 | | L,D-transpeptidase | low | > 75 |
| Pantoea sp. MT58 | 0.79 | IAI47_00340 | | response regulator | 0.61 | IAI47_12780 | | L,D-transpeptidase | low | > 76 |
| Rahnella sp. WP5 | 0.76 | EX31_RS03275 | | response regulator | 0.62 | EX31_RS18160 | | L,D-transpeptidase | low | > 89 |
| Enterobacter asburiae PDN3 | 0.74 | EX28DRAFT_3057 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 0.56 | EX28DRAFT_2011 | | Uncharacterized protein conserved in bacteria | low | > 76 |
| Serratia liquefaciens MT49 | 0.74 | IAI46_21235 | | response regulator | 0.63 | IAI46_08735 | | L,D-transpeptidase | low | > 86 |
| Klebsiella michiganensis M5al | 0.72 | BWI76_RS24335 | | two-component system response regulator QseB | 0.56 | BWI76_RS09850 | | L,D-transpeptidase | low | > 92 |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_03863 | | Transcriptional regulatory protein QseB | 0.57 | MPMX20_01583 | | putative L,D-transpeptidase YcbB | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.72 | GFF3138 | | Two-component system response regulator QseB | 0.56 | GFF3682 | | L,D-transpeptidase YcbB | low | > 78 |
| Escherichia coli ECOR27 | 0.71 | NOLOHH_10660 | | Transcriptional regulatory protein QseB | 0.55 | NOLOHH_21960 | ldtD | L,D-transpeptidase | low | > 75 |
| Escherichia coli ECRC62 | 0.71 | BNILDI_00855 | | Transcriptional regulatory protein QseB | 0.55 | BNILDI_20215 | ldtD | L,D-transpeptidase | low | > 75 |
| Escherichia coli ECRC101 | 0.71 | MCAODC_09395 | | Transcriptional regulatory protein QseB | 0.55 | MCAODC_24790 | ldtD | L,D-transpeptidase | low | > 87 |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_16645 | | Transcriptional regulatory protein QseB | 0.55 | NIAGMN_03120 | ldtD | L,D-transpeptidase | — | — |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_22515 | | Transcriptional regulatory protein QseB | 0.55 | JDDGAC_09010 | ldtD | L,D-transpeptidase | low | > 86 |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_09265 | | Transcriptional regulatory protein QseB | 0.55 | KEDOAH_22335 | ldtD | L,D-transpeptidase | — | — |
| Escherichia coli ECRC100 | 0.71 | OKFHMN_18880 | | Transcriptional regulatory protein QseB | 0.55 | OKFHMN_05400 | ldtD | L,D-transpeptidase | low | > 80 |
| Escherichia coli BW25113 | 0.71 | b3025 | qseB | DNA-binding response regulator in two-component regulatory system with QseC (NCBI) | 0.55 | b0925 | ycbB | predicted carboxypeptidase (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.70 | EFB2_00788 | | Transcriptional regulatory protein QseB | 0.55 | EFB2_03139 | | putative L,D-transpeptidase YcbB | low | > 86 |
| Escherichia coli ECOR38 | 0.70 | HEPCGN_17740 | | Quorum sensing DNA-binding response regulator in two-component regulatory system with QseC | 0.55 | HEPCGN_23125 | ldtD | L,D-transpeptidase | low | > 87 |
| Escherichia coli BL21 | 0.70 | ECD_02897 | | quorum sensing DNA-binding response regulator in two-component regulatory system with QseC | 0.55 | ECD_00929 | | murein L,D-transpeptidase | low | > 61 |
| Escherichia coli Nissle 1917 | 0.70 | ECOLIN_RS17425 | | quorum sensing response regulator transcription factor QseB | 0.55 | ECOLIN_RS04895 | | L,D-transpeptidase | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.70 | OHPLBJKB_00677 | | Transcriptional regulatory protein QseB | 0.55 | OHPLBJKB_02742 | | hypothetical protein | low | > 73 |
| Pseudomonas sp. RS175 | 0.50 | PFR28_02328 | | Transcriptional regulatory protein QseB | 0.14 | PFR28_01849 | | hypothetical protein | low | > 88 |
| Pseudomonas simiae WCS417 | 0.50 | PS417_13595 | | XRE family transcriptional regulator | 0.14 | PS417_15375 | | peptidoglycan-binding protein | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_3169 | | Two-component system response regulator QseB | 0.17 | PfGW456L13_3972 | | hypothetical protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_23845 | | XRE family transcriptional regulator | 0.17 | AO356_26185 | | peptidoglycan-binding protein | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_1539 | | Two-component system response regulator QseB | 0.16 | Pf6N2E2_1111 | | cell wall degradation protein | low | > 103 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_3476 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | 0.17 | Psest_4007 | | Uncharacterized protein conserved in bacteria | low | > 67 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_19370 | | transcriptional regulator | 0.15 | AO353_29055 | | peptidoglycan-binding protein | low | > 101 |
| Rhodanobacter denitrificans FW104-10B01 | 0.44 | LRK54_RS14145 | | response regulator transcription factor | 0.18 | LRK54_RS06230 | | L,D-transpeptidase family protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.44 | LRK55_RS13865 | | response regulator transcription factor | 0.18 | LRK55_RS05975 | | L,D-transpeptidase family protein | low | > 63 |
Not shown: 32 genomes with orthologs for HER17_RS21560 only; 6 genomes with orthologs for HER17_RS12045 only