Conservation of cofitness between HER17_RS20780 and HER17_RS11800 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS20780 lipopolysaccharide heptosyltransferase RfaC 1.0 HER17_RS11800 murein DD-endopeptidase MepM 0.88 6
Dickeya dianthicola ME23 0.78 DZA65_RS00815 lipopolysaccharide heptosyltransferase RfaC 0.77 DZA65_RS10550 murein DD-endopeptidase MepM — —
Dickeya dadantii 3937 0.77 DDA3937_RS20450 lipopolysaccharide heptosyltransferase RfaC 0.76 DDA3937_RS10105 murein DD-endopeptidase MepM — —
Dickeya dianthicola 67-19 0.77 HGI48_RS00760 lipopolysaccharide heptosyltransferase RfaC 0.77 HGI48_RS10135 murein DD-endopeptidase MepM — —
Rahnella sp. WP5 0.77 EX31_RS14405 lipopolysaccharide heptosyltransferase RfaC 0.73 EX31_RS10670 murein DD-endopeptidase MepM 0.60 28
Serratia liquefaciens MT49 0.77 IAI46_24745 lipopolysaccharide heptosyltransferase RfaC 0.82 IAI46_14600 murein DD-endopeptidase MepM — —
Pantoea sp. MT58 0.73 IAI47_00680 lipopolysaccharide heptosyltransferase RfaC 0.74 IAI47_08470 murein DD-endopeptidase MepM — —
Escherichia coli ECOR27 0.73 NOLOHH_07570 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 NOLOHH_16750 mepM murein DD-endopeptidase MepM — —
Escherichia coli BW25113 0.72 b3621 rfaC ADP-heptose:LPS heptosyl transferase I (NCBI) 0.77 b1856 yebA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC101 0.72 MCAODC_06200 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 MCAODC_19095 mepM murein DD-endopeptidase MepM — —
Escherichia coli ECRC102 0.72 NIAGMN_13450 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 NIAGMN_01750 mepM murein DD-endopeptidase MepM — —
Escherichia coli ECRC98 0.72 JDDGAC_19315 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 JDDGAC_00885 mepM murein DD-endopeptidase MepM — —
Escherichia coli ECRC99 0.72 KEDOAH_12460 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 KEDOAH_01795 mepM murein DD-endopeptidase MepM — —
Escherichia coli ECRC100 0.72 OKFHMN_15690 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 OKFHMN_26310 mepM murein DD-endopeptidase MepM — —
Enterobacter sp. TBS_079 0.72 MPMX20_00112 Lipopolysaccharide heptosyltransferase 1 0.78 MPMX20_02761 Murein DD-endopeptidase MepM — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS20655 lipopolysaccharide heptosyltransferase RfaC 0.77 ECOLIN_RS10340 murein DD-endopeptidase MepM — —
Escherichia fergusonii Becca 0.72 EFB2_00190 Lipopolysaccharide heptosyltransferase 1 0.77 EFB2_02086 Murein DD-endopeptidase MepM — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00079 Lipopolysaccharide heptosyltransferase 1 0.77 OHPLBJKB_01872 Murein DD-endopeptidase MepM — —
Escherichia coli BL21 0.71 ECD_03478 ADP-heptose:LPS heptosyl transferase I 0.77 ECD_01827 murein DD-endopeptidase, space-maker hydrolase, septation protein — —
Escherichia coli ECOR38 0.71 HEPCGN_14535 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 HEPCGN_04715 mepM murein DD-endopeptidase MepM — —
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3873 lipopolysaccharide heptosyltransferase I 0.77 EX28DRAFT_0700 Membrane proteins related to metalloendopeptidases — —
Escherichia coli ECRC62 0.71 BNILDI_03940 rfaC lipopolysaccharide heptosyltransferase RfaC 0.77 BNILDI_15540 mepM murein DD-endopeptidase MepM — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF390 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.77 GFF1635 Cell wall endopeptidase, family M23/M37 low > 78
Erwinia tracheiphila SCR3 0.70 LU632_RS21925 rfaC lipopolysaccharide heptosyltransferase RfaC 0.71 LU632_RS13390 mepM murein DD-endopeptidase MepM — —
Klebsiella michiganensis M5al 0.68 BWI76_RS27270 ADP-heptose--LPS heptosyl transferase I 0.76 BWI76_RS18125 murein DD-endopeptidase MepM — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_12880 ADP-heptose--LPS heptosyltransferase 0.22 AO353_07140 peptidase M23 low > 101
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_0521 Glycosyl transferase, family 9 0.22 Psyr_4566 Peptidase M23B — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_0521 Glycosyl transferase, family 9 0.22 Psyr_4566 Peptidase M23B — —
Pseudomonas stutzeri RCH2 0.49 Psest_0452 lipopolysaccharide heptosyltransferase I 0.23 Psest_3636 Membrane proteins related to metalloendopeptidases — —
Pseudomonas putida KT2440 0.48 PP_0342 ADP-heptose:LPS heptosyltransferase I 0.23 PP_0435 Peptidase, M23/M37 family — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3670 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 0.22 Pf6N2E2_4839 Cell wall endopeptidase, family M23/M37 — —
Castellaniella sp019104865 MT123 0.36 ABCV34_RS13305 lipopolysaccharide heptosyltransferase I 0.17 ABCV34_RS10570 peptidoglycan DD-metalloendopeptidase family protein — —
Marinobacter adhaerens HP15 0.11 HP15_438 lipopolysaccharide biosynthesis protein 0.20 HP15_357 peptidase M23B — —

Not shown: 23 genomes with orthologs for HER17_RS20780 only; 11 genomes with orthologs for HER17_RS11800 only