Conservation of cofitness between HER17_RS00495 and HER17_RS11380 in Pectobacterium carotovorum WPP14

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00495 branched-chain amino acid ABC transporter substrate-binding protein 1.0 HER17_RS11380 metal ABC transporter permease 0.96 10
Dickeya dadantii 3937 0.91 DDA3937_RS00660 branched-chain amino acid ABC transporter substrate-binding protein 0.62 DDA3937_RS08140 metal ABC transporter permease low > 74
Rahnella sp. WP5 0.88 EX31_RS14805 branched-chain amino acid ABC transporter substrate-binding protein 0.65 EX31_RS01095 metal ABC transporter permease low > 89
Dickeya dianthicola 67-19 0.88 HGI48_RS20730 high-affinity branched-chain amino acid ABC transporter substrate-binding protein 0.61 HGI48_RS07870 metal ABC transporter permease low > 71
Dickeya dianthicola ME23 0.88 DZA65_RS21740 branched-chain amino acid ABC transporter substrate-binding protein 0.61 DZA65_RS08460 metal ABC transporter permease 0.34 74
Serratia liquefaciens MT49 0.87 IAI46_00960 branched-chain amino acid ABC transporter substrate-binding protein 0.76 IAI46_10875 metal ABC transporter permease low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS19255 branched-chain amino acid ABC transporter substrate-binding protein 0.50 LU632_RS14635 metal ABC transporter permease low > 74
Escherichia coli ECOR27 0.79 NOLOHH_08535 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.50 NOLOHH_19580 sitD iron/manganese ABC transporter permease subunit SitD
Escherichia fergusonii Becca 0.79 EFB2_00364 Leucine-specific-binding protein 0.52 EFB2_02779 Manganese transport system membrane protein MntB low > 86
Escherichia coli Nissle 1917 0.79 ECOLIN_RS19775 high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.52 ECOLIN_RS06985 iron/manganese ABC transporter permease subunit SitD
Pantoea sp. MT58 0.78 IAI47_01565 branched-chain amino acid ABC transporter substrate-binding protein 0.48 IAI47_19070 metal ABC transporter permease low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF545 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.50 GFF4730 Manganese ABC transporter, inner membrane permease protein SitD low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS26350 branched chain amino acid ABC transporter substrate-binding protein 0.48 BWI76_RS22440 iron ABC transporter permease low > 92
Azospirillum sp. SherDot2 0.38 MPMX19_04840 Leu/Ile/Val-binding protein 0.17 MPMX19_03092 High-affinity zinc uptake system membrane protein ZnuB low > 112
Rhodospirillum rubrum S1H 0.38 Rru_A1746 Extracellular ligand-binding receptor (NCBI) 0.47 Rru_A2892 ABC-3 transporter component (NCBI) 0.44 41
Sinorhizobium meliloti 1021 0.37 SMc00078 Leu/Ile/Val-binding protein 0.48 SMc02506 iron transport system membrane ABC transporter protein
Agrobacterium fabrum C58 0.33 Atu2422 ABC transporter, substrate binding protein (amino acid) 0.49 Atu4468 iron transport ABC transporter permease low > 89
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU0547 high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) 0.16 DVU1341 znuC permease component of zinc ABC transporter (Dmitry Rodionov) low > 55
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_2607 Extracellular ligand-binding receptor (RefSeq) 0.18 DvMF_0117 ABC-3 protein (RefSeq) low > 51
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS00600 branched-chain amino acid ABC transporter substrate-binding protein 0.11 QEN71_RS02565 metal ABC transporter permease low > 153
Bifidobacterium breve UCC2003 0.14 BBR_RS18075 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein 0.14 BBR_RS14255 metal ABC transporter permease
Dinoroseobacter shibae DFL-12 0.12 Dshi_1522 Extracellular ligand-binding receptor (RefSeq) 0.53 Dshi_1656 ABC-3 protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.10 PGA1_c15890 extracellular ligand-binding receptor 0.17 PGA1_c32750 manganese transport system membrane protein MntD

Not shown: 47 genomes with orthologs for HER17_RS00495 only; 7 genomes with orthologs for HER17_RS11380 only