Conservation of cofitness between HER17_RS12300 and HER17_RS10525 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12300 formate transporter FocA 1.0 HER17_RS10525 fumarate/nitrate reduction transcriptional regulator Fnr 0.92 5
Dickeya dianthicola ME23 0.88 DZA65_RS09980 formate transporter FocA 0.97 DZA65_RS11360 fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Serratia liquefaciens MT49 0.88 IAI46_08615 formate transporter FocA 0.94 IAI46_13260 FNR family transcription factor 0.57 21
Dickeya dadantii 3937 0.88 DDA3937_RS09660 formate transporter FocA 0.97 DDA3937_RS10950 fumarate/nitrate reduction transcriptional regulator Fnr 0.71 5
Dickeya dianthicola 67-19 0.87 HGI48_RS09670 formate transporter FocA 0.97 HGI48_RS10900 fumarate/nitrate reduction transcriptional regulator Fnr low > 71
Rahnella sp. WP5 0.85 EX31_RS18265 formate transporter FocA 0.94 EX31_RS07200 FNR family transcription factor 0.58 43
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_02764 putative formate transporter 1 0.96 OHPLBJKB_02348 Fumarate and nitrate reduction regulatory protein low > 73
Klebsiella michiganensis M5al 0.83 BWI76_RS09740 formate transporter FocA 0.95 BWI76_RS16185 transcriptional regulator FNR — —
Escherichia coli BW25113 0.83 b0904 focA formate transporter (NCBI) 0.96 b1334 fnr DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (NCBI) 0.43 7
Escherichia coli Nissle 1917 0.83 ECOLIN_RS04790 formate transporter FocA 0.96 ECOLIN_RS08005 fumarate/nitrate reduction transcriptional regulator Fnr low > 55
Escherichia coli ECRC100 0.83 OKFHMN_05505 focA formate transporter FocA 0.96 OKFHMN_02240 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 80
Escherichia coli ECOR27 0.83 NOLOHH_22065 focA formate transporter FocA 0.96 NOLOHH_19940 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Escherichia coli ECRC62 0.83 BNILDI_20320 focA formate transporter FocA 0.96 BNILDI_18090 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 75
Escherichia coli ECRC102 0.83 NIAGMN_03225 focA formate transporter FocA 0.96 NIAGMN_26410 fnr fumarate/nitrate reduction transcriptional regulator Fnr — —
Escherichia coli ECRC98 0.83 JDDGAC_09115 focA formate transporter FocA 0.95 JDDGAC_04785 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 86
Escherichia coli ECRC99 0.83 KEDOAH_22230 focA formate transporter FocA 0.96 KEDOAH_26530 fnr fumarate/nitrate reduction transcriptional regulator Fnr — —
Escherichia coli ECRC101 0.83 MCAODC_24895 focA formate transporter FocA 0.95 MCAODC_16030 fnr fumarate/nitrate reduction transcriptional regulator Fnr low > 87
Erwinia tracheiphila SCR3 0.80 LU632_RS09780 focA formate transporter FocA 0.88 LU632_RS11420 FNR family transcription factor low > 74
Pantoea sp. MT58 0.80 IAI47_12875 formate transporter FocA 0.92 IAI47_09580 FNR family transcription factor 0.73 3
Enterobacter sp. TBS_079 0.78 MPMX20_01563 putative formate transporter 1 0.95 MPMX20_02035 Fumarate and nitrate reduction regulatory protein 0.21 53
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3661 Formate efflux transporter (TC 2.A.44 family) 0.96 GFF2656 Fumarate and nitrate reduction regulatory protein low > 78
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_08525 formate transporter FocA 0.86 CSW01_07190 transcriptional regulator FNR low > 62
Azospirillum sp. SherDot2 0.36 MPMX19_02844 putative formate transporter 1 0.27 MPMX19_00212 Nitrogen fixation regulation protein FixK low > 112
Azospirillum brasilense Sp245 0.35 AZOBR_RS30145 formate transporter 0.28 AZOBR_RS01145 Crp/Fnr family transcriptional regulator low > 97
Pseudomonas syringae pv. syringae B728a 0.24 Psyr_4660 Formate/nitrite transporter 0.52 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.24 Psyr_4660 Formate/nitrite transporter 0.52 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp — —
Alteromonas macleodii MIT1002 0.16 MIT1002_01529 Formate channel 1 0.57 MIT1002_02137 Fumarate and nitrate reduction regulatory protein low > 70
Pseudomonas sp. S08-1 0.14 OH686_20565 Nitrite transporter from formate/nitrite family 0.52 OH686_02245 Fumarate and nitrate reduction regulatory protein low > 80
Castellaniella sp019104865 MT123 0.13 ABCV34_RS06885 formate/nitrite transporter family protein 0.36 ABCV34_RS06835 helix-turn-helix domain-containing protein low > 48
Marinobacter adhaerens HP15 0.13 HP15_3885 formate and nitrite transporter 0.43 HP15_634 transcriptional regulator, Crp/Fnr family low > 73
Pseudomonas stutzeri RCH2 0.13 Psest_2408 Formate/nitrite family of transporters 0.54 Psest_2538 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases low > 67

Not shown: 7 genomes with orthologs for HER17_RS12300 only; 47 genomes with orthologs for HER17_RS10525 only