Conservation of cofitness between HER17_RS02310 and HER17_RS09515 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02310 methionine synthase 1.0 HER17_RS09515 phage shock protein operon transcriptional activator 0.56 16
Dickeya dianthicola ME23 0.88 DZA65_RS20250 methionine synthase 0.79 DZA65_RS12950 phage shock protein operon transcriptional activator low > 75
Rahnella sp. WP5 0.88 EX31_RS11760 methionine synthase 0.80 EX31_RS15690 phage shock protein operon transcriptional activator low > 89
Dickeya dadantii 3937 0.88 DDA3937_RS19040 methionine synthase 0.80 DDA3937_RS12430 phage shock protein operon transcriptional activator low > 74
Klebsiella michiganensis M5al 0.88 BWI76_RS01685 methionine synthase 0.76 BWI76_RS12445 phage shock protein operon transcriptional activator low > 92
Serratia liquefaciens MT49 0.88 IAI46_23155 methionine synthase 0.80 IAI46_13505 phage shock protein operon transcriptional activator low > 86
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.74 EX28DRAFT_0975 psp operon transcriptional activator PspF low > 76
Dickeya dianthicola 67-19 0.87 HGI48_RS19130 methionine synthase 0.79 HGI48_RS12500 phage shock protein operon transcriptional activator low > 71
Enterobacter sp. TBS_079 0.87 MPMX20_00235 Methionine synthase 0.74 MPMX20_02473 Psp operon transcriptional activator low > 85
Escherichia coli BL21 0.87 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 0.77 ECD_01280 psp operon transcriptional activator — —
Escherichia coli ECRC99 0.87 KEDOAH_14920 metH methionine synthase 0.77 KEDOAH_26360 pspF phage shock protein operon transcriptional activator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_04030 Methionine synthase 0.77 OHPLBJKB_02379 Psp operon transcriptional activator low > 73
Escherichia coli ECRC100 0.87 OKFHMN_13240 metH methionine synthase 0.77 OKFHMN_02415 pspF phage shock protein operon transcriptional activator low > 80
Escherichia coli ECRC101 0.87 MCAODC_03740 metH methionine synthase 0.77 MCAODC_15855 pspF phage shock protein operon transcriptional activator low > 87
Escherichia coli ECRC102 0.87 NIAGMN_10990 metH methionine synthase 0.77 NIAGMN_26585 pspF phage shock protein operon transcriptional activator — —
Escherichia coli BW25113 0.87 b4019 metH B12-dependent methionine synthase (NCBI) 0.77 b1303 pspF psp operon transcriptional activator (VIMSS) low > 76
Escherichia coli ECRC98 0.87 JDDGAC_16865 metH methionine synthase 0.77 JDDGAC_04960 pspF phage shock protein operon transcriptional activator low > 86
Escherichia coli ECOR38 0.87 HEPCGN_11885 metH methionine synthase 0.77 HEPCGN_25785 pspF phage shock protein operon transcriptional activator low > 87
Escherichia coli ECRC62 0.87 BNILDI_06140 metH methionine synthase 0.77 BNILDI_18250 pspF phage shock protein operon transcriptional activator low > 75
Escherichia coli ECOR27 0.87 NOLOHH_05380 metH methionine synthase 0.77 NOLOHH_20100 pspF phage shock protein operon transcriptional activator low > 75
Escherichia coli Nissle 1917 0.87 ECOLIN_RS23160 methionine synthase 0.77 ECOLIN_RS07845 phage shock protein operon transcriptional activator — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.75 GFF2687 Psp operon transcriptional activator low > 78
Escherichia fergusonii Becca 0.86 EFB2_04592 Methionine synthase 0.77 EFB2_02624 Psp operon transcriptional activator low > 86
Pantoea sp. MT58 0.86 IAI47_17990 methionine synthase 0.75 IAI47_09390 phage shock protein operon transcriptional activator low > 76
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_02060 methionine synthase 0.62 CSW01_08440 phage shock protein operon transcriptional activator low > 62
Shewanella amazonensis SB2B 0.66 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.61 Sama_1236 psp operon transcriptional activator (RefSeq) low > 62
Shewanella sp. ANA-3 0.66 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) 0.61 Shewana3_2649 Fis family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) 0.61 SO1806 pspF psp operon transcriptional activator (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.64 Shew_0710 metH B12-dependent methionine synthase (RefSeq) 0.61 Shew_2497 sigma-54 dependent trancsriptional regulator (RefSeq) low > 60
Azospirillum sp. SherDot2 0.21 MPMX19_00637 Methionine synthase 0.57 MPMX19_02138 Psp operon transcriptional activator — —
Rhodospirillum rubrum S1H 0.21 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) 0.51 Rru_A1219 Sigma54 Specific Transcriptional Regulator containing PAS, and Fis DNA-binding domains (NCBI) — —

Not shown: 32 genomes with orthologs for HER17_RS02310 only; 5 genomes with orthologs for HER17_RS09515 only