Conservation of cofitness between HER17_RS09565 and HER17_RS08725 in Pectobacterium carotovorum WPP14

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS09565 YcjF family protein 1.0 HER17_RS08725 beta-N-acetylhexosaminidase 0.49 13
Escherichia coli ECOR38 0.75 HEPCGN_25880 ycjF UPF0283 membrane protein YcjF 0.79 HEPCGN_23980 nagZ beta-N-acetylhexosaminidase low > 87
Escherichia coli ECRC102 0.75 NIAGMN_26480 ycjF UPF0283 membrane protein YcjF 0.79 NIAGMN_24325 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli ECRC100 0.75 OKFHMN_02310 ycjF UPF0283 membrane protein YcjF 0.79 OKFHMN_03505 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli ECRC99 0.75 KEDOAH_26465 ycjF UPF0283 membrane protein YcjF 0.79 KEDOAH_24250 nagZ beta-N-acetylhexosaminidase — —
Escherichia coli ECRC98 0.75 JDDGAC_04855 ycjF UPF0283 membrane protein YcjF 0.79 JDDGAC_07165 nagZ beta-N-acetylhexosaminidase low > 86
Escherichia coli ECRC101 0.75 MCAODC_15960 ycjF UPF0283 membrane protein YcjF 0.79 MCAODC_22865 nagZ beta-N-acetylhexosaminidase low > 87
Escherichia coli BW25113 0.74 b1322 ycjF hypothetical protein (NCBI) 0.80 b1107 nagZ beta-hexosaminidase (NCBI) low > 76
Escherichia coli BL21 0.74 ECD_01299 UPF0283 family inner membrane protein 0.79 ECD_01103 beta N-acetyl-glucosaminidase — —
Escherichia fergusonii Becca 0.74 EFB2_02605 hypothetical protein 0.79 EFB2_02868 Beta-hexosaminidase low > 86
Escherichia coli ECOR27 0.74 NOLOHH_20005 ycjF UPF0283 membrane protein YcjF 0.79 NOLOHH_21035 nagZ beta-N-acetylhexosaminidase low > 75
Escherichia coli ECRC62 0.74 BNILDI_18155 ycjF UPF0283 membrane protein YcjF 0.79 BNILDI_19195 nagZ beta-N-acetylhexosaminidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_02360 hypothetical protein 0.79 OHPLBJKB_02559 Beta-hexosaminidase low > 73
Escherichia coli Nissle 1917 0.74 ECOLIN_RS07940 YcjF family protein 0.78 ECOLIN_RS06390 beta-N-acetylhexosaminidase — —
Pantoea sp. MT58 0.74 IAI47_09420 TIGR01620 family protein 0.74 IAI47_11995 beta-N-acetylhexosaminidase low > 76
Serratia liquefaciens MT49 0.74 IAI46_13475 TIGR01620 family protein 0.79 IAI46_09900 beta-N-acetylhexosaminidase low > 86
Dickeya dadantii 3937 0.73 DDA3937_RS12405 TIGR01620 family protein 0.79 DDA3937_RS13050 beta-N-acetylhexosaminidase low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS12475 TIGR01620 family protein 0.79 HGI48_RS13115 beta-N-acetylhexosaminidase low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS12925 TIGR01620 family protein 0.78 DZA65_RS13585 beta-N-acetylhexosaminidase low > 75
Rahnella sp. WP5 0.70 EX31_RS15660 TIGR01620 family protein 0.74 EX31_RS24500 beta-N-acetylhexosaminidase low > 89
Enterobacter asburiae PDN3 0.70 EX28DRAFT_0993 TIGR01620 family protein 0.78 EX28DRAFT_1823 Beta-glucosidase-related glycosidases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF2680 Membrane protein YcjF 0.77 GFF3390 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) low > 78
Erwinia tracheiphila SCR3 0.68 LU632_RS11535 YcjF family protein 0.72 LU632_RS14755 nagZ beta-N-acetylhexosaminidase low > 74
Klebsiella michiganensis M5al 0.67 BWI76_RS12480 TIGR01620 family protein 0.77 BWI76_RS11165 beta-N-acetylhexosaminidase low > 92
Enterobacter sp. TBS_079 0.67 MPMX20_02455 hypothetical protein 0.79 MPMX20_01788 Beta-hexosaminidase low > 85
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_06600 TIGR01620 family protein 0.55 CSW01_03620 beta-hexosaminidase low > 62
Shewanella loihica PV-4 0.22 Shew_2492 hypothetical protein (RefSeq) 0.45 Shew_1626 beta-hexosaminidase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.22 SO1811 conserved hypothetical protein (NCBI ptt file) 0.45 SO2250 nagZ beta-hexosaminidase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.21 Shewana3_2644 hypothetical protein (RefSeq) 0.45 Shewana3_2293 beta-hexosaminidase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.20 Sama_1241 hypothetical protein (RefSeq) 0.45 Sama_1326 beta-hexosaminidase (RefSeq) low > 62
Rhodopseudomonas palustris CGA009 0.14 TX73_008130 TIGR01620 family protein 0.19 TX73_014770 beta-N-acetylhexosaminidase low > 86

Not shown: 2 genomes with orthologs for HER17_RS09565 only; 48 genomes with orthologs for HER17_RS08725 only