Conservation of cofitness between HER17_RS19710 and HER17_RS08685 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS19710 alcohol dehydrogenase 1.0 HER17_RS08685 metal-dependent hydrolase 0.62 2
Serratia liquefaciens MT49 0.81 IAI46_21750 alcohol dehydrogenase 0.79 IAI46_09825 metal-dependent hydrolase low > 86
Dickeya dadantii 3937 0.81 DDA3937_RS01800 alcohol dehydrogenase 0.83 DDA3937_RS13085 metal-dependent hydrolase low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS01695 alcohol dehydrogenase 0.84 HGI48_RS13150 metal-dependent hydrolase low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS01770 alcohol dehydrogenase 0.83 DZA65_RS13620 metal-dependent hydrolase low > 75
Enterobacter sp. TBS_079 0.76 MPMX20_03855 Alcohol dehydrogenase YqhD 0.75 MPMX20_01780 putative metal-dependent hydrolase YcfH low > 85
Escherichia coli BW25113 0.76 b3011 yqhD alcohol dehydrogenase, NAD(P)-dependent (NCBI) 0.74 b1100 ycfH predicted metallodependent hydrolase (NCBI) low > 76
Escherichia coli ECOR38 0.76 HEPCGN_17810 yqhD alcohol dehydrogenase 0.74 HEPCGN_23940 ycfH metal-dependent hydrolase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00690 Alcohol dehydrogenase YqhD 0.75 OHPLBJKB_02566 putative metal-dependent hydrolase YcfH low > 73
Escherichia coli BL21 0.76 ECD_02884 aldehyde reductase, NADPH-dependent 0.75 ECD_01096 putative DNase low > 61
Escherichia coli ECRC62 0.76 BNILDI_00795 yqhD alcohol dehydrogenase 0.74 BNILDI_19230 ycfH metal-dependent hydrolase low > 75
Escherichia fergusonii Becca 0.76 EFB2_00799 Alcohol dehydrogenase YqhD 0.74 EFB2_02875 putative metal-dependent hydrolase YcfH low > 86
Klebsiella michiganensis M5al 0.76 BWI76_RS24300 NADH-dependent alcohol dehydrogenase 0.76 BWI76_RS11125 metal-dependent hydrolase low > 92
Enterobacter asburiae PDN3 0.76 EX28DRAFT_3049 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 0.76 EX28DRAFT_1829 hydrolase, TatD family low > 76
Escherichia coli ECRC99 0.76 KEDOAH_09200 yqhD alcohol dehydrogenase 0.74 KEDOAH_24215 ycfH metal-dependent hydrolase
Escherichia coli ECRC100 0.76 OKFHMN_18945 yqhD alcohol dehydrogenase 0.74 OKFHMN_03540 ycfH metal-dependent hydrolase low > 80
Escherichia coli ECRC102 0.76 NIAGMN_16710 yqhD alcohol dehydrogenase 0.74 NIAGMN_24290 ycfH metal-dependent hydrolase
Escherichia coli ECRC101 0.76 MCAODC_09460 yqhD alcohol dehydrogenase 0.74 MCAODC_22900 ycfH metal-dependent hydrolase low > 87
Escherichia coli ECOR27 0.76 NOLOHH_10720 yqhD alcohol dehydrogenase 0.74 NOLOHH_21070 ycfH metal-dependent hydrolase
Escherichia coli ECRC98 0.76 JDDGAC_22580 yqhD alcohol dehydrogenase 0.74 JDDGAC_07200 ycfH metal-dependent hydrolase low > 86
Escherichia coli Nissle 1917 0.75 ECOLIN_RS17335 alcohol dehydrogenase 0.74 ECOLIN_RS06350 metal-dependent hydrolase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3124 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.74 GFF3382 Putative deoxyribonuclease YcfH low > 78
Pseudomonas putida KT2440 0.63 PP_2492 alcohol dehydrogenase, NAD(P)-dependent 0.47 PP_1967 tRNA D-aminoacylase low > 96
Acinetobacter radioresistens SK82 0.62 MPMX26_00884 Alcohol dehydrogenase YqhD 0.42 MPMX26_01224 putative metal-dependent hydrolase YcfH
Alteromonas macleodii MIT1002 0.60 MIT1002_02460 Alcohol dehydrogenase YqhD 0.49 MIT1002_01740 putative deoxyribonuclease YcfH low > 70
Acidovorax sp. GW101-3H11 0.59 Ac3H11_4515 NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) 0.41 Ac3H11_2488 Putative deoxyribonuclease YcfH low > 79
Shewanella sp. ANA-3 0.58 Shewana3_0261 iron-containing alcohol dehydrogenase (RefSeq) 0.50 Shewana3_1769 TatD family hydrolase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO4469 alcohol dehydrogenase, iron-containing (NCBI ptt file) 0.50 SO2610 hydrolase, TatD family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.52 Shew_0070 iron-containing alcohol dehydrogenase (RefSeq) 0.49 Shew_1582 TatD family hydrolase (RefSeq) low > 60
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU2201 b3011 alcohol dehydrogenase, iron-containing (TIGR) 0.27 DVU3202 hydrolase, TatD family (TIGR) low > 55
Parabacteroides merdae CL09T00C40 0.50 HMPREF1078_RS01985 iron-containing alcohol dehydrogenase 0.23 HMPREF1078_RS11120 TatD family hydrolase low > 61
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_17690 NADH-dependent alcohol dehydrogenase 0.54 CSW01_10060 YchF/TatD family DNA exonuclease low > 62
Pseudomonas sp. S08-1 0.44 OH686_06550 NADPH-dependent broad range aldehyde dehydrogenase YqhD 0.44 OH686_22180 Uncharacterized metal-dependent hydrolase YcfH low > 80
Dechlorosoma suillum PS 0.26 Dsui_2116 Fe-dependent oxidoreductase, alcohol dehydrogenase 0.43 Dsui_2652 hydrolase, TatD family low > 51

Not shown: 8 genomes with orthologs for HER17_RS19710 only; 55 genomes with orthologs for HER17_RS08685 only