Conservation of cofitness between HER17_RS21350 and HER17_RS08260 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS21350 EAL domain-containing protein 1.0 HER17_RS08260 flagella biosynthesis chaperone FliJ 0.55 14
Pantoea sp. MT58 0.45 IAI47_01435 EAL domain-containing protein 0.55 IAI47_08010 flagella biosynthesis chaperone FliJ low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF4237 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.57 GFF4014 Flagellar protein FliJ low > 78
Escherichia coli ECRC99 0.30 KEDOAH_23215 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.58 KEDOAH_02400 fliJ flagella biosynthesis chaperone FliJ — —
Escherichia coli ECRC101 0.30 MCAODC_23905 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.58 MCAODC_19700 fliJ flagella biosynthesis chaperone FliJ low > 87
Escherichia coli ECRC98 0.30 JDDGAC_08140 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.58 JDDGAC_00280 fliJ flagella biosynthesis chaperone FliJ — —
Escherichia coli ECRC102 0.30 NIAGMN_23805 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.58 NIAGMN_02360 fliJ flagella biosynthesis chaperone FliJ — —
Escherichia coli ECRC100 0.30 OKFHMN_04530 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) 0.58 OKFHMN_25695 fliJ flagella biosynthesis chaperone FliJ — —
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS34735 diguanylate phosphodiesterase 0.31 RR42_RS23550 flagellar export protein FliJ low > 128
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_5006 Rtn protein 0.19 Pf1N1B4_3608 Flagellar protein FliJ — —
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_452 Rtn protein 0.19 Pf6N2E2_2589 Flagellar protein FliJ low > 103
Enterobacter sp. TBS_079 0.21 MPMX20_02720 putative cyclic di-GMP phosphodiesterase PdeD 0.56 MPMX20_02939 Flagellar FliJ protein low > 85
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_2932 Rtn protein 0.20 PfGW456L13_4349 Flagellar protein FliJ — —
Pseudomonas fluorescens SBW25 0.21 PFLU_RS14595 EAL domain-containing protein 0.21 PFLU_RS21755 flagella biosynthesis chaperone FliJ low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS14595 EAL domain-containing protein 0.21 PFLU_RS21755 flagella biosynthesis chaperone FliJ low > 109
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_22830 diguanylate phosphodiesterase 0.19 AO356_03815 flagellar biogenesis protein low > 104
Pseudomonas simiae WCS417 0.20 PS417_14020 diguanylate phosphodiesterase 0.21 PS417_19785 flagellar biogenesis protein low > 88
Enterobacter asburiae PDN3 0.20 EX28DRAFT_1790 FOG: EAL domain 0.55 EX28DRAFT_0612 flagellar export protein FliJ low > 76
Serratia liquefaciens MT49 0.20 IAI46_14800 EAL domain-containing protein 0.64 IAI46_15860 flagella biosynthesis chaperone FliJ low > 86
Escherichia fergusonii Becca 0.20 EFB2_01680 putative cyclic di-GMP phosphodiesterase PdeN 0.58 EFB2_02004 Flagellar FliJ protein low > 86
Escherichia coli ECRC62 0.20 BNILDI_13890 pdeN cyclic di-GMP phosphodiesterase 0.58 BNILDI_15115 fliJ flagella biosynthesis chaperone FliJ low > 75
Escherichia coli ECOR27 0.20 NOLOHH_14970 pdeN cyclic di-GMP phosphodiesterase 0.58 NOLOHH_16325 fliJ flagella biosynthesis chaperone FliJ low > 75
Escherichia coli ECOR38 0.20 HEPCGN_22660 pdeN cyclic di-GMP phosphodiesterase 0.59 HEPCGN_04055 fliJ flagella biosynthesis chaperone FliJ low > 87
Escherichia coli Nissle 1917 0.20 ECOLIN_RS12725 cyclic di-GMP phosphodiesterase 0.58 ECOLIN_RS11080 flagellar export protein FliJ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_01533 putative cyclic di-GMP phosphodiesterase PdeN 0.58 OHPLBJKB_01787 Flagellar FliJ protein low > 73
Escherichia coli BW25113 0.20 b2176 rtn hypothetical protein (NCBI) 0.58 b1942 fliJ flagellar biosynthesis chaperone (NCBI) low > 76
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_26940 diguanylate phosphodiesterase 0.20 AO353_18700 flagellar biogenesis protein low > 101
Shewanella oneidensis MR-1 0.19 SO3821 rtn protein (NCBI ptt file) 0.17 SO3224 fliJ flagellar protein FliJ (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.19 PP_3435 conserved protein of unknown function 0.19 PP_4365 Flagellar protein FliJ low > 96
Dickeya dadantii 3937 0.18 DDA3937_RS13005 EAL domain-containing protein 0.67 DDA3937_RS13385 flagella biosynthesis chaperone FliJ low > 74
Dickeya dianthicola ME23 0.18 DZA65_RS13535 EAL domain-containing protein 0.66 DZA65_RS13915 flagella biosynthesis chaperone FliJ low > 75
Dickeya dianthicola 67-19 0.17 HGI48_RS13070 EAL domain-containing protein 0.66 HGI48_RS13430 flagella biosynthesis chaperone FliJ low > 71
Erwinia tracheiphila SCR3 0.17 LU632_RS13190 cyclic diguanylate phosphodiesterase 0.61 LU632_RS10555 fliJ flagella biosynthesis chaperone FliJ low > 74
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_06460 diguanylate phosphodiesterase 0.32 H281DRAFT_05782 flagellar FliJ protein — —
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS37740 EAL domain-containing protein 0.36 QEN71_RS28815 flagellar export protein FliJ low > 153

Not shown: 2 genomes with orthologs for HER17_RS21350 only; 20 genomes with orthologs for HER17_RS08260 only