Conservation of cofitness between HER17_RS07710 and HER17_RS08085 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS07710 UvrY/SirA/GacA family response regulator transcription factor 1.0 HER17_RS08085 flagellar transcriptional regulator FlhC 0.71 12
Dickeya dianthicola ME23 0.92 DZA65_RS14290 UvrY/SirA/GacA family response regulator transcription factor 0.96 DZA65_RS14090 flagellar transcriptional regulator FlhC low > 75
Dickeya dianthicola 67-19 0.91 HGI48_RS13800 UvrY/SirA/GacA family response regulator transcription factor 0.96 HGI48_RS13605 flagellar transcriptional regulator FlhC low > 71
Dickeya dadantii 3937 0.91 DDA3937_RS13705 UvrY/SirA/GacA family response regulator transcription factor 0.96 DDA3937_RS13560 flagellar transcriptional regulator FlhC low > 74
Serratia liquefaciens MT49 0.88 IAI46_09205 UvrY/SirA/GacA family response regulator transcription factor 0.89 IAI46_16055 flagellar transcriptional regulator FlhC low > 86
Rahnella sp. WP5 0.87 EX31_RS24145 UvrY/SirA/GacA family response regulator transcription factor 0.87 EX31_RS11420 flagellar transcriptional regulator FlhC low > 89
Pantoea sp. MT58 0.86 IAI47_12470 UvrY/SirA/GacA family response regulator transcription factor 0.83 IAI47_08285 flagellar transcriptional regulator FlhC low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1699 BarA-associated response regulator UvrY (= GacA = SirA) 0.84 GFF1672 Flagellar transcriptional activator FlhC low > 78
Escherichia coli Nissle 1917 0.84 ECOLIN_RS10900 UvrY/SirA/GacA family response regulator transcription factor 0.84 ECOLIN_RS10795 flagellar transcriptional regulator FlhC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_01815 Response regulator UvrY 0.84 OHPLBJKB_01837 Flagellar transcriptional regulator FlhC low > 73
Escherichia coli BW25113 0.84 b1914 uvrY response regulator (NCBI) 0.84 b1891 flhC DNA-binding transcriptional dual regulator with FlhD (NCBI) low > 76
Escherichia fergusonii Becca 0.84 EFB2_02032 Response regulator UvrY 0.84 EFB2_02052 Flagellar transcriptional regulator FlhC low > 86
Escherichia coli ECRC99 0.84 KEDOAH_02270 uvrC excinuclease ABC subunit UvrC 0.84 KEDOAH_02000 flhC flagellar transcriptional regulator FlhC — —
Escherichia coli ECRC62 0.84 BNILDI_15230 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.84 BNILDI_15335 flhC flagellar transcriptional regulator FlhC low > 75
Escherichia coli ECRC100 0.84 OKFHMN_25820 uvrC excinuclease ABC subunit UvrC 0.84 OKFHMN_26105 flhC flagellar transcriptional regulator FlhC low > 80
Escherichia coli ECRC98 0.84 JDDGAC_00410 uvrC excinuclease ABC subunit UvrC 0.84 JDDGAC_00680 flhC flagellar transcriptional regulator FlhC low > 86
Escherichia coli ECOR27 0.84 NOLOHH_16440 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.84 NOLOHH_16545 flhC flagellar transcriptional regulator FlhC low > 75
Escherichia coli ECRC101 0.84 MCAODC_19570 uvrC excinuclease ABC subunit UvrC 0.84 MCAODC_19300 flhC flagellar transcriptional regulator FlhC low > 87
Escherichia coli ECRC102 0.84 NIAGMN_02230 uvrC excinuclease ABC subunit UvrC 0.84 NIAGMN_01955 flhC flagellar transcriptional regulator FlhC — —
Escherichia coli ECOR38 0.84 HEPCGN_04175 uvrC excinuclease ABC subunit UvrC 0.84 HEPCGN_04525 flhC flagellar transcriptional regulator FlhC low > 87
Enterobacter sp. TBS_079 0.83 MPMX20_02839 Response regulator UvrY 0.85 MPMX20_02801 Flagellar transcriptional regulator FlhC low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0633 two component transcriptional regulator, LuxR family 0.85 EX28DRAFT_0659 Flagellar transcriptional activator (FlhC) low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS10190 uvrY UvrY/SirA/GacA family response regulator transcription factor 0.82 LU632_RS13575 flhC flagellar transcriptional regulator FlhC — —
Ralstonia solanacearum GMI1000 0.38 RS_RS01435 DNA-binding response regulator 0.51 RS_RS23940 flagellar transcriptional regulator FlhC low > 80
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS10600 DNA-binding response regulator 0.51 RALBFv3_RS17370 flagellar transcriptional regulator FlhC low > 76
Ralstonia solanacearum PSI07 0.38 RPSI07_RS22720 DNA-binding response regulator 0.52 RPSI07_RS06275 flagellar transcriptional regulator FlhC low > 81
Ralstonia solanacearum UW163 0.38 UW163_RS02980 DNA-binding response regulator 0.51 UW163_RS21780 flagellar transcriptional regulator FlhC — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS06400 response regulator transcription factor 0.51 ABZR87_RS17935 flagellar transcriptional regulator FlhC low > 80
Variovorax sp. SCN45 0.37 GFF2564 Two-component transcriptional response regulator, LuxR family 0.55 GFF5760 Flagellar transcriptional activator FlhC low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2789 DNA-binding response regulator, LuxR family 0.50 GFF1438 Flagellar transcriptional activator FlhC low > 90
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3852 DNA-binding response regulator, LuxR family 0.47 Ac3H11_3559 Flagellar transcriptional activator FlhC — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS00785 LuxR family transcriptional regulator 0.60 RR42_RS35820 flagellar transcriptional regulator FlhC low > 128
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS13890 LuxR family transcriptional regulator 0.54 HSERO_RS14985 transcriptional regulator 0.98 2
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS13150 hisitidine kinase 0.61 BPHYT_RS19020 transcriptional regulator — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS05525 response regulator transcription factor 0.62 QEN71_RS29030 flagellar transcriptional regulator FlhC low > 153

Not shown: 46 genomes with orthologs for HER17_RS07710 only; 3 genomes with orthologs for HER17_RS08085 only