Conservation of cofitness between HER17_RS16015 and HER17_RS07130 in Pectobacterium carotovorum WPP14

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS16015 proline-specific permease ProY 1.0 HER17_RS07130 NADH-quinone oxidoreductase subunit B 0.69 6
Dickeya dianthicola ME23 0.88 DZA65_RS05835 proline-specific permease ProY 0.93 DZA65_RS14980 NADH-quinone oxidoreductase subunit B — —
Dickeya dianthicola 67-19 0.88 HGI48_RS05510 proline-specific permease ProY 0.93 HGI48_RS14305 NADH-quinone oxidoreductase subunit B low > 71
Rahnella sp. WP5 0.85 EX31_RS22070 proline-specific permease ProY 0.92 EX31_RS19430 NADH-quinone oxidoreductase subunit B low > 89
Pantoea sp. MT58 0.83 IAI47_14830 proline-specific permease ProY 0.94 IAI47_06365 NADH-quinone oxidoreductase subunit B low > 76
Serratia liquefaciens MT49 0.83 IAI46_04800 proline-specific permease ProY 0.95 IAI46_17705 NADH-quinone oxidoreductase subunit B low > 86
Dickeya dadantii 3937 0.82 DDA3937_RS05450 proline-specific permease ProY 0.93 DDA3937_RS14330 NADH-quinone oxidoreductase subunit B — —
Klebsiella michiganensis M5al 0.82 BWI76_RS06245 proline-specific permease ProY 0.95 BWI76_RS20185 NADH-quinone oxidoreductase subunit B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4300 Proline-specific permease proY 0.91 GFF1890 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2572 Gamma-aminobutyrate permease and related permeases 0.94 EX28DRAFT_0322 NADH-quinone oxidoreductase, B subunit low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_00989 Proline-specific permease ProY 0.94 MPMX20_03217 NADH-quinone oxidoreductase subunit B low > 85
Escherichia coli ECOR38 0.78 HEPCGN_07170 proY proline-specific permease ProY 0.91 HEPCGN_22050 nuoB NADH-quinone oxidoreductase subunit NuoB 0.63 11
Escherichia coli ECRC101 0.78 MCAODC_27755 proY proline-specific permease ProY 0.91 MCAODC_13885 nuoB NADH-quinone oxidoreductase subunit NuoB low > 87
Escherichia coli ECRC102 0.78 NIAGMN_06585 proY proline-specific permease ProY 0.91 NIAGMN_20615 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli ECRC62 0.78 BNILDI_22875 proY proline-specific permease ProY 0.91 BNILDI_13385 nuoB NADH-quinone oxidoreductase subunit NuoB low > 75
Escherichia fergusonii Becca 0.78 EFB2_03655 Proline-specific permease ProY 0.91 EFB2_01572 NADH-quinone oxidoreductase subunit B low > 86
Escherichia coli ECRC99 0.78 KEDOAH_19435 proY proline-specific permease ProY 0.91 KEDOAH_05350 nuoB NADH-quinone oxidoreductase subunit NuoB — —
Escherichia coli BW25113 0.78 b0402 proY predicted cryptic proline transporter (NCBI) 0.91 b2287 nuoB NADH dehydrogenase subunit B (NCBI) low > 76
Escherichia coli BL21 0.78 ECD_00350 proline-specific permease 0.91 ECD_02212 NADH:ubiquinone oxidoreductase, chain B low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03274 Proline-specific permease ProY 0.91 OHPLBJKB_01419 NADH-quinone oxidoreductase subunit B low > 73
Escherichia coli ECOR27 0.78 NOLOHH_01460 proY proline-specific permease ProY 0.91 NOLOHH_14465 nuoB NADH-quinone oxidoreductase subunit NuoB low > 75
Escherichia coli Nissle 1917 0.78 ECOLIN_RS02425 proline-specific permease ProY 0.91 ECOLIN_RS13280 NADH-quinone oxidoreductase subunit NuoB low > 55
Escherichia coli ECRC98 0.78 JDDGAC_12185 proY proline-specific permease ProY 0.91 JDDGAC_26810 nuoB NADH-quinone oxidoreductase subunit NuoB low > 86
Escherichia coli ECRC100 0.78 OKFHMN_08530 proY proline-specific permease ProY 0.91 OKFHMN_22845 nuoB NADH-quinone oxidoreductase subunit NuoB low > 80
Erwinia tracheiphila SCR3 0.72 LU632_RS18885 proY proline-specific permease ProY 0.93 LU632_RS07970 NADH-quinone oxidoreductase subunit B low > 74
Pseudomonas simiae WCS417 0.64 PS417_01755 proline-specific permease 0.83 PS417_16580 NADH dehydrogenase — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS01810 amino acid permease 0.84 PFLU_RS18620 NADH-quinone oxidoreductase subunit B low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS01810 amino acid permease 0.84 PFLU_RS18620 NADH-quinone oxidoreductase subunit B low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.83 Psyr_3198 NADH dehydrogenase subunit B — —
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_4834 histidine:proton symporter, AAT family 0.83 Psyr_3198 NADH dehydrogenase subunit B low > 86
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_1580 Histidine transport protein (permease) 0.83 Pf1N1B4_4040 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) low > 87
Pseudomonas putida KT2440 0.63 PP_5031 proline (histidine) APC transporter 0.80 PP_4120 NADH-quinone oxidoreductase subunit B low > 96
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_12275 histidine permease (from data) 0.83 AO353_27745 NADH dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_318 Histidine transport protein (permease) 0.83 PfGW456L13_2632 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) low > 87
Pseudomonas sp. RS175 0.56 PFR28_03490 Proline-specific permease ProY 0.82 PFR28_02628 NADH-quinone oxidoreductase subunit B — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_17670 L-alanine and D-alanine permease (from data) 0.83 AO356_22065 NADH dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5459 D-serine/D-alanine/glycine transporter 0.83 Pf6N2E2_276 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) — —

Not shown: 7 genomes with orthologs for HER17_RS16015 only; 7 genomes with orthologs for HER17_RS07130 only