Conservation of cofitness between HER17_RS11645 and HER17_RS05040 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11645 two-component system sensor histidine kinase PhoQ 1.0 HER17_RS05040 nicotinamide-nucleotide amidase 0.90 15
Dickeya dadantii 3937 0.77 DDA3937_RS11505 two-component system sensor histidine kinase PhoQ 0.72 DDA3937_RS16250 nicotinamide-nucleotide amidase low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS11550 two-component system sensor histidine kinase PhoQ 0.71 HGI48_RS16360 nicotinamide-nucleotide amidase 0.62 9
Dickeya dianthicola ME23 0.76 DZA65_RS11885 two-component system sensor histidine kinase PhoQ 0.72 DZA65_RS17455 nicotinamide-nucleotide amidase low > 75
Serratia liquefaciens MT49 0.68 IAI46_10390 two-component system sensor histidine kinase PhoQ 0.64 IAI46_03835 nicotinamide-nucleotide amidase low > 86
Rahnella sp. WP5 0.67 EX31_RS24555 two-component system sensor histidine kinase PhoQ 0.61 EX31_RS07805 nicotinamide-nucleotide amidase low > 89
Pantoea sp. MT58 0.64 IAI47_11935 two-component system sensor histidine kinase PhoQ 0.64 IAI47_04295 nicotinamide-nucleotide amidase low > 76
Erwinia tracheiphila SCR3 0.63 LU632_RS14595 phoQ two-component system sensor histidine kinase PhoQ 0.57 LU632_RS15740 pncC nicotinamide-nucleotide amidase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3414 Sensor protein PhoQ (EC 2.7.13.3) 0.65 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 78
Escherichia coli BL21 0.61 ECD_01127 sensory histidine kinase in two-component regulatory system with PhoP 0.65 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase — —
Escherichia coli ECOR27 0.61 NOLOHH_20920 phoQ two-component system sensor histidine kinase PhoQ 0.64 NOLOHH_12540 pncC nicotinamide-nucleotide amidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_02539 Sensor protein PhoQ 0.65 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC low > 73
Escherichia coli ECOR38 0.61 HEPCGN_24195 phoQ two-component system sensor histidine kinase PhoQ 0.64 HEPCGN_19895 pncC nicotinamide-nucleotide amidase low > 87
Escherichia coli ECRC62 0.61 BNILDI_19085 phoQ two-component system sensor histidine kinase PhoQ 0.65 BNILDI_11100 pncC nicotinamide-nucleotide amidase low > 75
Escherichia coli Nissle 1917 0.61 ECOLIN_RS06605 two-component system sensor histidine kinase PhoQ 0.65 ECOLIN_RS15065 nicotinamide-nucleotide amidase low > 55
Escherichia fergusonii Becca 0.61 EFB2_02846 Sensor protein PhoQ 0.64 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC low > 86
Escherichia coli BW25113 0.61 b1129 phoQ sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) 0.65 b2700 ygaD competence damage-inducible protein A (NCBI) low > 76
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1801 Signal transduction histidine kinase 0.62 EX28DRAFT_2786 amidohydrolase, PncC family low > 76
Escherichia coli ECRC102 0.61 NIAGMN_24870 phoQ two-component system sensor histidine kinase PhoQ 0.64 NIAGMN_18470 pncC nicotinamide-nucleotide amidase — —
Escherichia coli ECRC98 0.61 JDDGAC_06640 phoQ two-component system sensor histidine kinase PhoQ 0.64 JDDGAC_24365 pncC nicotinamide-nucleotide amidase low > 86
Escherichia coli ECRC99 0.61 KEDOAH_24810 phoQ two-component system sensor histidine kinase PhoQ 0.64 KEDOAH_07435 pncC nicotinamide-nucleotide amidase — —
Escherichia coli ECRC100 0.61 OKFHMN_00725 phoQ two-component system sensor histidine kinase PhoQ 0.64 OKFHMN_20700 pncC nicotinamide-nucleotide amidase low > 80
Escherichia coli ECRC101 0.61 MCAODC_22360 phoQ two-component system sensor histidine kinase PhoQ 0.64 MCAODC_11225 pncC nicotinamide-nucleotide amidase low > 87
Klebsiella michiganensis M5al 0.60 BWI76_RS11275 sensor protein PhoQ 0.61 BWI76_RS22185 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.60 MPMX20_01810 Virulence sensor histidine kinase PhoQ 0.62 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC low > 85
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3484 Sensor protein PhoQ (EC 2.7.13.3) 0.42 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.28 81
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_2012 Sensor protein PhoQ (EC 2.7.13.3) 0.40 PfGW456L13_4669 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 87
Pseudomonas sp. RS175 0.22 PFR28_03243 Virulence sensor histidine kinase PhoQ 0.40 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC low > 88
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_02810 histidine kinase 0.42 AO353_16800 damage-inducible protein CinA low > 101
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5705 Sensor protein PhoQ (EC 2.7.13.3) 0.40 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS low > 103
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_18970 histidine kinase 0.42 AO356_05675 damage-inducible protein CinA low > 104
Pseudomonas stutzeri RCH2 0.21 Psest_3884 Signal transduction histidine kinase 0.46 Psest_2873 competence/damage-inducible protein CinA C-terminal domain low > 67
Pseudomonas putida KT2440 0.20 PP_1187 sensor protein 0.41 PP_1628 NMN amidohydrolase low > 96
Pseudomonas fluorescens SBW25 0.18 PFLU_RS23125 HAMP domain-containing protein 0.42 PFLU_RS05880 CinA family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS23125 HAMP domain-containing protein 0.42 PFLU_RS05880 CinA family protein low > 109
Pseudomonas simiae WCS417 0.18 PS417_21510 histidine kinase 0.42 PS417_05810 damage-inducible protein CinA low > 88

Not shown: 0 genomes with orthologs for HER17_RS11645 only; 46 genomes with orthologs for HER17_RS05040 only