Conservation of cofitness between HER17_RS12030 and HER17_RS01130 in Pectobacterium carotovorum WPP14

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 1.0 HER17_RS01130 ATP-dependent RNA helicase RhlB 0.87 20
Serratia liquefaciens MT49 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.91 IAI46_00575 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli ECRC62 0.87 BNILDI_20195 aspC aspartate transaminase 0.89 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB 0.86 24
Escherichia coli BL21 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent 0.89 ECD_03658 ATP-dependent RNA helicase — —
Escherichia coli ECOR38 0.87 HEPCGN_23140 aspC aspartate transaminase 0.89 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECOR27 0.87 NOLOHH_21940 aspC aspartate transaminase 0.89 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 75
Escherichia coli BW25113 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.89 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02738 Aspartate aminotransferase 0.89 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB 0.35 64
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04910 aspartate transaminase 0.89 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB — —
Rahnella sp. WP5 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.85 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Escherichia fergusonii Becca 0.86 EFB2_03136 Aspartate aminotransferase 0.89 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli ECRC99 0.86 KEDOAH_22350 aspC aspartate transaminase 0.88 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC102 0.86 NIAGMN_03105 aspC aspartate transaminase 0.88 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC100 0.86 OKFHMN_05385 aspC aspartate transaminase 0.88 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli ECRC101 0.86 MCAODC_24775 aspC aspartate transaminase 0.88 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC98 0.86 JDDGAC_08995 aspC aspartate transaminase 0.88 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 86
Dickeya dianthicola 67-19 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.91 HGI48_RS20225 ATP-dependent RNA helicase RhlB low > 71
Klebsiella michiganensis M5al 0.86 BWI76_RS09870 aromatic amino acid aminotransferase 0.87 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Enterobacter sp. TBS_079 0.86 MPMX20_01586 Aspartate aminotransferase 0.89 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.89 GFF2892 ATP-dependent RNA helicase RhlB 0.85 43
Dickeya dadantii 3937 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.91 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.89 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.91 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Pantoea sp. MT58 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.86 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.85 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 74
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) low > 60
Shewanella sp. ANA-3 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.67 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Shewanella amazonensis SB2B 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.66 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) low > 62
Shewanella oneidensis MR-1 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.67 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06530 aromatic amino acid aminotransferase 0.73 CSW01_01555 ATP-dependent RNA helicase RhlB low > 62
Marinobacter adhaerens HP15 0.45 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) 0.40 HP15_2099 DEAD/DEAH box helicase domain protein low > 73
Alteromonas macleodii MIT1002 0.45 MIT1002_02269 Aspartate aminotransferase 0.61 MIT1002_00515 ATP-dependent RNA helicase RhlB — —

Not shown: 20 genomes with orthologs for HER17_RS12030 only; 4 genomes with orthologs for HER17_RS01130 only