Conservation of cofitness between HER17_RS11645 and HER17_RS00515 in Pectobacterium carotovorum WPP14

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11645 two-component system sensor histidine kinase PhoQ 1.0 HER17_RS00515 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.89 19
Dickeya dadantii 3937 0.77 DDA3937_RS11505 two-component system sensor histidine kinase PhoQ 0.94 DDA3937_RS00680 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 74
Dickeya dianthicola 67-19 0.76 HGI48_RS11550 two-component system sensor histidine kinase PhoQ 0.94 HGI48_RS20710 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 71
Serratia liquefaciens MT49 0.68 IAI46_10390 two-component system sensor histidine kinase PhoQ 0.84 IAI46_00980 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 86
Rahnella sp. WP5 0.67 EX31_RS24555 two-component system sensor histidine kinase PhoQ 0.90 EX31_RS14785 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 89
Pantoea sp. MT58 0.64 IAI47_11935 two-component system sensor histidine kinase PhoQ 0.89 IAI47_01585 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 76
Erwinia tracheiphila SCR3 0.63 LU632_RS14595 phoQ two-component system sensor histidine kinase PhoQ 0.90 LU632_RS19235 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3414 Sensor protein PhoQ (EC 2.7.13.3) 0.90 GFF552 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) low > 78
Escherichia coli BL21 0.61 ECD_01127 sensory histidine kinase in two-component regulatory system with PhoP 0.91 ECD_03303 branched-chain amino acid ABC transporter ATPase — —
Escherichia fergusonii Becca 0.61 EFB2_02846 Sensor protein PhoQ 0.91 EFB2_00368 High-affinity branched-chain amino acid transport ATP-binding protein LivF low > 86
Escherichia coli Nissle 1917 0.61 ECOLIN_RS06605 two-component system sensor histidine kinase PhoQ 0.91 ECOLIN_RS19755 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 55
Escherichia coli ECOR27 0.61 NOLOHH_20920 phoQ two-component system sensor histidine kinase PhoQ 0.91 NOLOHH_08555 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 75
Escherichia coli ECRC62 0.61 BNILDI_19085 phoQ two-component system sensor histidine kinase PhoQ 0.91 BNILDI_02950 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_02539 Sensor protein PhoQ 0.90 OHPLBJKB_00249 High-affinity branched-chain amino acid transport ATP-binding protein LivF low > 73
Escherichia coli ECOR38 0.61 HEPCGN_24195 phoQ two-component system sensor histidine kinase PhoQ 0.90 HEPCGN_15580 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 87
Escherichia coli BW25113 0.61 b1129 phoQ sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) 0.91 b3454 livF ATP-binding component of leucine transport (VIMSS) low > 76
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1801 Signal transduction histidine kinase 0.90 EX28DRAFT_4286 ABC-type branched-chain amino acid transport systems, ATPase component low > 76
Escherichia coli ECRC100 0.61 OKFHMN_00725 phoQ two-component system sensor histidine kinase PhoQ 0.91 OKFHMN_16760 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 80
Escherichia coli ECRC99 0.61 KEDOAH_24810 phoQ two-component system sensor histidine kinase PhoQ 0.91 KEDOAH_11380 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF — —
Escherichia coli ECRC101 0.61 MCAODC_22360 phoQ two-component system sensor histidine kinase PhoQ 0.91 MCAODC_07290 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 87
Escherichia coli ECRC102 0.61 NIAGMN_24870 phoQ two-component system sensor histidine kinase PhoQ 0.91 NIAGMN_14530 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF — —
Escherichia coli ECRC98 0.61 JDDGAC_06640 phoQ two-component system sensor histidine kinase PhoQ 0.91 JDDGAC_20390 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF low > 86
Klebsiella michiganensis M5al 0.60 BWI76_RS11275 sensor protein PhoQ 0.91 BWI76_RS26330 ABC transporter ATP-binding protein low > 92
Enterobacter sp. TBS_079 0.60 MPMX20_01810 Virulence sensor histidine kinase PhoQ 0.91 MPMX20_04330 High-affinity branched-chain amino acid transport ATP-binding protein LivF low > 85
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_3484 Sensor protein PhoQ (EC 2.7.13.3) 0.66 Pf1N1B4_3214 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) low > 87
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_2012 Sensor protein PhoQ (EC 2.7.13.3) 0.66 PfGW456L13_4611 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) low > 87
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_02810 histidine kinase 0.66 AO353_17105 ABC transporter ATP-binding protein low > 101
Pseudomonas sp. RS175 0.22 PFR28_03243 Virulence sensor histidine kinase PhoQ 0.66 PFR28_00536 High-affinity branched-chain amino acid transport ATP-binding protein LivF low > 88
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5705 Sensor protein PhoQ (EC 2.7.13.3) 0.66 Pf6N2E2_2926 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 2 LivF (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_18970 histidine kinase 0.66 AO356_05340 ABC transporter ATP-binding protein low > 104
Pseudomonas stutzeri RCH2 0.21 Psest_3884 Signal transduction histidine kinase 0.67 Psest_1308 ABC-type branched-chain amino acid transport systems, ATPase component low > 67
Pseudomonas putida KT2440 0.20 PP_1187 sensor protein 0.66 PP_1137 high-affinity branched-chain amino acid transporter, ATP binding low > 96
Pseudomonas simiae WCS417 0.18 PS417_21510 histidine kinase 0.67 PS417_06595 ABC transporter ATP-binding protein — —
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS23125 HAMP domain-containing protein 0.67 PFLU_RS06625 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.18 PFLU_RS23125 HAMP domain-containing protein 0.67 PFLU_RS06625 ABC transporter ATP-binding protein low > 109

Not shown: 1 genomes with orthologs for HER17_RS11645 only; 37 genomes with orthologs for HER17_RS00515 only