Conservation of cofitness between HEPCGN_01360 and HEPCGN_26220 in Escherichia coli ECOR38

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_01360 histidine ammonia-lyase 1.0 HEPCGN_26220 rlhA 23S rRNA 5-hydroxycytidine C2501 synthase 0.50 17
Shewanella oneidensis MR-1 0.53 SO3057 Pal/histidase family protein (NCBI ptt file) 0.44 SO3797 peptidase, U32 family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.53 Shewana3_1490 phenylalanine/histidine ammonia-lyase (RefSeq) 0.45 Shewana3_0800 peptidase U32 (RefSeq) low > 73
Shewanella loihica PV-4 0.53 Shew_2280 phenylalanine/histidine ammonia-lyase (RefSeq) 0.46 Shew_0818 peptidase U32 (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_4833 histidine ammonia-lyase 0.70 Psyr_3097 Peptidase U32 low > 86
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_4833 histidine ammonia-lyase 0.70 Psyr_3097 Peptidase U32 low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF668 Histidine ammonia-lyase (EC 4.3.1.3) 0.93 GFF2594 putative collagenase low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF3589 Histidine ammonia-lyase (EC 4.3.1.3) 0.50 GFF4570 Probable collagenase (EC 3.4.24.3) — —
Pseudomonas sp. S08-1 0.17 OH686_16755 histidine ammonia-lyase 0.68 OH686_20270 Uncharacterized protease YdcP low > 80
Pseudomonas fluorescens SBW25 0.17 PFLU_RS01805 histidine ammonia-lyase 0.69 PFLU_RS15170 U32 family peptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS01805 histidine ammonia-lyase 0.69 PFLU_RS15170 U32 family peptidase low > 109
Klebsiella michiganensis M5al 0.16 BWI76_RS08740 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.89 BWI76_RS13375 protease low > 92
Pseudomonas sp. RS175 0.16 PFR28_04971 Histidine ammonia-lyase 0.70 PFR28_01648 23S rRNA 5-hydroxycytidine synthase low > 88
Enterobacter asburiae PDN3 0.16 EX28DRAFT_2219 histidine ammonia-lyase (EC 4.3.1.3) 0.91 EX28DRAFT_1222 Collagenase and related proteases low > 76
Enterobacter sp. TBS_079 0.15 MPMX20_01400 Histidine ammonia-lyase 0.92 MPMX20_02244 23S rRNA 5-hydroxycytidine synthase low > 85
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS11575 histidine ammonia-lyase 0.41 HMPREF1078_RS09995 U32 family peptidase low > 61
Bacteroides ovatus ATCC 8483 0.14 BACOVA_00991 histidine ammonia-lyase 0.39 BACOVA_03008 peptidase, U32 family low > 94
Shewanella amazonensis SB2B 0.14 Sama_1631 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.44 Sama_0677 U32 family peptidase (RefSeq) low > 62
Bacteroides stercoris CC31F 0.14 HMPREF1181_RS00340 histidine ammonia-lyase 0.36 HMPREF1181_RS00100 U32 family peptidase low > 56
Bacteroides thetaiotaomicron VPI-5482 0.14 BT2690 histidine ammonia-lyase (NCBI ptt file) 0.38 BT2412 putative collagenase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.14 HMPREF1058_RS02545 histidine ammonia-lyase 0.37 HMPREF1058_RS14685 U32 family peptidase low > 67
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS01830 histidine ammonia-lyase 0.38 ABI39_RS10365 U32 family peptidase low > 72

Not shown: 42 genomes with orthologs for HEPCGN_01360 only; 21 genomes with orthologs for HEPCGN_26220 only