Conservation of cofitness between HEPCGN_04840 and HEPCGN_01640 in Escherichia coli ECOR38

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.0 HEPCGN_01640 bioB biotin synthase BioB 0.57 5
Escherichia coli ECOR27 0.99 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NOLOHH_22770 bioB biotin synthase BioB — —
Escherichia coli ECRC62 0.99 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 BNILDI_21040 bioB biotin synthase BioB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 1.00 OHPLBJKB_02938 Biotin synthase low > 73
Escherichia coli BL21 0.98 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 1.00 ECD_00742 biotin synthase — —
Escherichia coli BW25113 0.98 b1835 yebU putative nucleolar proteins (VIMSS) 1.00 b0775 bioB biotin synthase (NCBI) low > 76
Escherichia fergusonii Becca 0.98 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 1.00 EFB2_03330 Biotin synthase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 ECOLIN_RS04130 biotin synthase BioB — —
Escherichia coli ECRC101 0.98 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 MCAODC_25615 bioB biotin synthase BioB low > 87
Escherichia coli ECRC102 0.98 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NIAGMN_04445 bioB biotin synthase BioB — —
Escherichia coli ECRC100 0.98 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 OKFHMN_06400 bioB biotin synthase BioB — —
Escherichia coli ECRC98 0.98 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 JDDGAC_10035 bioB biotin synthase BioB low > 86
Escherichia coli ECRC99 0.98 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 KEDOAH_21510 bioB biotin synthase BioB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 0.95 GFF671 Biotin synthase (EC 2.8.1.6) low > 78
Enterobacter asburiae PDN3 0.81 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.90 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.89 MPMX20_01403 Biotin synthase low > 85
Klebsiella michiganensis M5al 0.77 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.94 BWI76_RS08760 biotin synthase low > 92
Pantoea sp. MT58 0.70 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.83 IAI47_13530 biotin synthase BioB low > 76
Serratia liquefaciens MT49 0.69 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.87 IAI46_06525 biotin synthase BioB 0.52 11
Rahnella sp. WP5 0.67 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 EX31_RS23695 biotin synthase BioB low > 89
Pectobacterium carotovorum WPP14 0.67 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.87 HER17_RS13460 biotin synthase BioB low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 DDA3937_RS08510 biotin synthase BioB low > 74
Dickeya dianthicola ME23 0.65 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 DZA65_RS08965 biotin synthase BioB low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.85 HGI48_RS08675 biotin synthase BioB low > 71
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.71 CSW01_05645 biotin synthase low > 62
Shewanella sp. ANA-3 0.51 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.67 Shewana3_2519 biotin synthase (RefSeq) low > 73
Shewanella loihica PV-4 0.51 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.66 Shew_1719 biotin synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.50 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) 0.67 SO2740 bioB biotin synthase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.48 Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.67 Sama_1438 biotin synthase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_0839 NOL1/NOP2/sun family putative RNA methylase 0.62 B158DRAFT_0864 biotin synthase (EC 2.8.1.6) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_1153 tRNA and rRNA cytosine-C5-methylases 0.54 Echvi_2566 biotin synthetase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_05610 rRNA methyltransferase 0.51 CA264_02425 biotin synthase BioB low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS00225 RNA methyltransferase 0.51 ABZR88_RS10190 biotin synthase BioB low > 71
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS16740 rRNA cytosine-C5-methyltransferase 0.25 HMPREF1078_RS15300 biotin synthase BioB low > 61

Not shown: 3 genomes with orthologs for HEPCGN_04840 only; 59 genomes with orthologs for HEPCGN_01640 only