Conservation of cofitness between GFF2454 and GFF83 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2454 Nitrogen regulatory protein P-II 1.0 GFF83 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 0.90 12
Escherichia coli ECRC98 1.00 JDDGAC_25165 glnB nitrogen regulatory protein P-II 0.85 JDDGAC_13920 mrcB bifunctional glycosyl transferase/transpeptidase low > 86
Escherichia coli BW25113 1.00 b2553 glnB regulatory protein P-II for glutamine synthetase (NCBI) 0.85 b0149 mrcB penicillin-binding protein 1b (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_06720 glnB nitrogen regulatory protein P-II 0.85 KEDOAH_17830 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01154 Nitrogen regulatory protein P-II 1 0.85 OHPLBJKB_03513 Penicillin-binding protein 1B low > 73
Escherichia coli ECRC100 1.00 OKFHMN_21500 glnB nitrogen regulatory protein P-II 0.85 OKFHMN_10325 mrcB bifunctional glycosyl transferase/transpeptidase low > 80
Escherichia coli ECRC102 1.00 NIAGMN_19270 glnB nitrogen regulatory protein P-II 0.85 NIAGMN_08175 mrcB bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECRC62 1.00 BNILDI_11975 glnB nitrogen regulatory protein P-II 0.85 BNILDI_09000 mrcB bifunctional glycosyl transferase/transpeptidase 0.81 25
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14450 nitrogen regulatory protein P-II 0.85 ECOLIN_RS00835 bifunctional glycosyl transferase/transpeptidase — —
Escherichia coli ECRC101 1.00 MCAODC_12030 glnB nitrogen regulatory protein P-II 0.85 MCAODC_00840 mrcB bifunctional glycosyl transferase/transpeptidase low > 87
Escherichia coli BL21 1.00 ECD_02445 regulatory protein P-II for glutamine synthetase 0.86 ECD_00148 fused glycosyl transferase and transpeptidase low > 61
Escherichia coli ECOR27 1.00 NOLOHH_13175 glnB nitrogen regulatory protein P-II 0.85 NOLOHH_02670 mrcB bifunctional glycosyl transferase/transpeptidase low > 75
Escherichia fergusonii Becca 1.00 EFB2_01343 Nitrogen regulatory protein P-II 1 0.85 EFB2_03895 Penicillin-binding protein 1B low > 86
Escherichia coli ECOR38 1.00 HEPCGN_20645 glnB nitrogen regulatory protein P-II 0.85 HEPCGN_08275 mrcB bifunctional glycosyl transferase/transpeptidase low > 87
Enterobacter sp. TBS_079 0.99 MPMX20_03422 Nitrogen regulatory protein P-II 0.86 MPMX20_00835 Penicillin-binding protein 1B low > 85
Enterobacter asburiae PDN3 0.99 EX28DRAFT_0097 nitrogen regulatory protein P-II family 0.85 EX28DRAFT_3738 penicillin-binding protein 1B low > 76
Klebsiella michiganensis M5al 0.99 BWI76_RS21245 nitrogen regulatory protein P-II 0.82 BWI76_RS05120 bifunctional glycosyl transferase/transpeptidase low > 92
Dickeya dadantii 3937 0.97 DDA3937_RS15635 nitrogen regulatory protein P-II 0.69 DDA3937_RS15915 bifunctional glycosyl transferase/transpeptidase low > 74
Dickeya dianthicola ME23 0.96 DZA65_RS16810 nitrogen regulatory protein P-II 0.68 DZA65_RS17115 bifunctional glycosyl transferase/transpeptidase low > 75
Erwinia tracheiphila SCR3 0.96 LU632_RS17925 glnB nitrogen regulatory protein P-II 0.73 LU632_RS20060 mrcB bifunctional glycosyl transferase/transpeptidase low > 74
Dickeya dianthicola 67-19 0.96 HGI48_RS15730 nitrogen regulatory protein P-II 0.67 HGI48_RS16030 bifunctional glycosyl transferase/transpeptidase low > 71
Pectobacterium carotovorum WPP14 0.95 HER17_RS05930 nitrogen regulatory protein P-II 0.69 HER17_RS05600 bifunctional glycosyl transferase/transpeptidase low > 75
Serratia liquefaciens MT49 0.95 IAI46_19450 nitrogen regulatory protein P-II 0.69 IAI46_21190 bifunctional glycosyl transferase/transpeptidase low > 86
Pantoea sp. MT58 0.95 IAI47_04950 nitrogen regulatory protein P-II 0.73 IAI47_15615 bifunctional glycosyl transferase/transpeptidase low > 76
Rahnella sp. WP5 0.94 EX31_RS20610 nitrogen regulatory protein P-II 0.66 EX31_RS03230 bifunctional glycosyl transferase/transpeptidase low > 89
Vibrio cholerae E7946 ATCC 55056 0.89 CSW01_11410 nitrogen regulatory protein P-II 0.41 CSW01_03175 penicillin-binding protein 1B low > 62
Shewanella oneidensis MR-1 0.85 SO3519 glnB-2 nitrogen regulatory protein P-II 1 (NCBI ptt file) 0.35 SO0633 mrcB penicillin-binding protein 1B (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.85 Shewana3_3124 nitrogen regulatory protein P-II (RefSeq) 0.35 Shewana3_0623 penicillin-binding protein 1B (RefSeq) low > 73
Shewanella amazonensis SB2B 0.84 Sama_0935 nitrogen regulatory protein P-II (RefSeq) 0.36 Sama_2971 peptidoglycan glycosyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.83 Shew_1110 nitrogen regulatory protein P-II (RefSeq) 0.34 Shew_3123 penicillin-binding protein 1B (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.82 B158DRAFT_2530 nitrogen regulatory protein P-II family 0.27 B158DRAFT_0038 penicillin-binding protein 1B low > 40
Alteromonas macleodii MIT1002 0.79 MIT1002_02726 Nitrogen regulatory protein P-II 0.32 MIT1002_00409 Murein polymerase low > 70
Lysobacter sp. OAE881 0.74 ABIE51_RS00145 P-II family nitrogen regulator 0.23 ABIE51_RS05185 penicillin-binding protein 1B low > 62

Not shown: 45 genomes with orthologs for GFF2454 only; 21 genomes with orthologs for GFF83 only