Conservation of cofitness between PS417_26340 and PS417_27920 in Pseudomonas simiae WCS417

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_26340 betaine-aldehyde dehydrogenase 1.0 PS417_27920 type VI secretion protein IcmF 0.25 9
Pseudomonas fluorescens SBW25 0.99 PFLU_RS27990 betaine-aldehyde dehydrogenase 0.99 PFLU_RS29600 type VI secretion system membrane subunit TssM low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS27990 betaine-aldehyde dehydrogenase 0.99 PFLU_RS29600 type VI secretion system membrane subunit TssM low > 109
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_2417 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.92 Pf1N1B4_2070 IcmF-related protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_07805 betaine-aldehyde dehydrogenase 0.91 AO353_09545 type VI secretion protein IcmF low > 101
Pseudomonas sp. RS175 0.93 PFR28_04167 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.90 PFR28_04450 hypothetical protein 0.23 52
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_4679 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 0.90 Pf6N2E2_4341 IcmF-related protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_13795 betaine-aldehyde dehydrogenase 0.90 AO356_12315 type VI secretion protein IcmF low > 104
Pseudomonas putida KT2440 0.88 PP_5063 betaine aldehyde dehydrogenase, NAD-dependent 0.15 PP_4071 conserved membrane protein of unknown function low > 96
Enterobacter sp. TBS_079 0.79 MPMX20_01229 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.28 MPMX20_02678 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.78 EX28DRAFT_2387 betaine-aldehyde dehydrogenase 0.28 EX28DRAFT_0790 type VI secretion protein IcmF low > 76
Escherichia coli ECRC98 0.77 JDDGAC_12695 betB betaine-aldehyde dehydrogenase 0.11 JDDGAC_13515 tssM type VI secretion system membrane subunit TssM low > 86
Escherichia coli ECRC101 0.77 MCAODC_28270 betB betaine-aldehyde dehydrogenase 0.11 MCAODC_00435 tssM type VI secretion system membrane subunit TssM low > 87
Escherichia coli ECRC100 0.77 OKFHMN_09045 betB betaine-aldehyde dehydrogenase 0.11 OKFHMN_09920 tssM type VI secretion system membrane subunit TssM low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_03363 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.12 OHPLBJKB_03439 hypothetical protein low > 73
Escherichia coli ECRC99 0.77 KEDOAH_18920 betB betaine-aldehyde dehydrogenase 0.11 KEDOAH_18235 tssM type VI secretion system membrane subunit TssM
Pantoea sp. MT58 0.77 IAI47_08650 betaine-aldehyde dehydrogenase 0.27 IAI47_11680 type VI secretion system membrane subunit TssM low > 76
Acinetobacter radioresistens SK82 0.77 MPMX26_02369 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.15 MPMX26_00969 hypothetical protein low > 36
Pectobacterium carotovorum WPP14 0.77 HER17_RS08390 betaine-aldehyde dehydrogenase 0.13 HER17_RS04905 type VI secretion system membrane subunit TssM low > 75
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS25160 NAD/NADP-dependent betaine aldehyde dehydrogenase 0.21 BPHYT_RS04540 type VI secretion protein VasK low > 109
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_02464 betaine aldehyde dehydrogenase 0.12 H281DRAFT_05373 type VI secretion system protein ImpL low > 103
Dickeya dadantii 3937 0.72 DDA3937_RS13265 betaine-aldehyde dehydrogenase 0.14 DDA3937_RS07080 type VI secretion system membrane subunit TssM low > 74
Paraburkholderia graminis OAS925 0.72 ABIE53_006148 betaine-aldehyde dehydrogenase 0.24 ABIE53_003925 type VI secretion system protein ImpL low > 113
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS08175 betaine-aldehyde dehydrogenase 0.21 QEN71_RS34515 type VI secretion system membrane subunit TssM low > 153
Marinobacter adhaerens HP15 0.57 HP15_3626 betaine aldehyde dehydrogenase 0.15 HP15_3463 type VI secretion protein IcmF low > 73
Agrobacterium fabrum C58 0.51 Atu0829 betaine aldehyde dehydrogenase 0.23 Atu4332 IcmF family protein low > 89
Variovorax sp. OAS795 0.40 ABID97_RS18885 aldehyde dehydrogenase family protein 0.35 ABID97_RS04995 type VI secretion system membrane subunit TssM low > 91
Variovorax sp. SCN45 0.39 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) 0.34 GFF6222 T6SS component TssM (IcmF/VasK) low > 127

Not shown: 22 genomes with orthologs for PS417_26340 only; 9 genomes with orthologs for PS417_27920 only