Conservation of cofitness between GFF1466 and GFF4633 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF1466 Alkylphosphonate utilization operon protein PhnA 1.0 GFF4633 Putative transport protein 0.64 19
Escherichia coli ECOR38 0.98 HEPCGN_11240 yjdM Protein YjdM 0.78 HEPCGN_01225 abrB Putative regulator AbrB low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_03937 hypothetical protein 0.80 OHPLBJKB_03002 hypothetical protein low > 73
Escherichia coli ECRC62 0.98 BNILDI_06620 yjdM Protein YjdM 0.80 BNILDI_21365 abrB Putative regulator AbrB — —
Escherichia coli BL21 0.98 ECD_03979 zinc-ribbon family protein 0.80 ECD_00675 regulator of aidB expression; inner membrane protein low > 60
Escherichia coli Nissle 1917 0.98 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM 0.78 ECOLIN_RS03825 AbrB family transcriptional regulator low > 52
Escherichia coli ECRC101 0.98 MCAODC_03115 yjdM Protein YjdM 0.80 MCAODC_26205 abrB Putative regulator AbrB — —
Escherichia coli ECRC98 0.98 JDDGAC_16240 yjdM Protein YjdM 0.80 JDDGAC_10640 abrB Putative regulator AbrB — —
Escherichia coli BW25113 0.98 b4108 phnA hypothetical protein (NCBI) 0.80 b0715 abrB putative transport protein (VIMSS) low > 76
Escherichia coli ECRC99 0.98 KEDOAH_15560 yjdM Protein YjdM 0.80 KEDOAH_20980 abrB Putative regulator AbrB — —
Escherichia coli ECRC101 0.98 OKFHMN_12605 yjdM Protein YjdM 0.80 OKFHMN_06985 abrB Putative regulator AbrB — —
Escherichia fergusonii Becca 0.98 EFB2_04475 hypothetical protein 0.78 EFB2_03388 hypothetical protein low > 86
Escherichia coli ECRC102 0.98 NIAGMN_10450 yjdM Protein YjdM 0.80 NIAGMN_05040 abrB Putative regulator AbrB — —
Escherichia coli ECOR27 0.98 NOLOHH_04870 yjdM Protein YjdM 0.80 NOLOHH_23370 abrB Putative regulator AbrB low > 57
Klebsiella michiganensis M5al 0.93 BWI76_RS02240 alkylphosphonate utilization operon protein PhnA 0.63 BWI76_RS12490 AbrB family transcriptional regulator low > 92
Serratia liquefaciens MT49 0.91 IAI46_06020 phnA family protein 0.59 IAI46_00750 AbrB family transcriptional regulator low > 86
Pectobacterium carotovorum WPP14 0.75 HER17_RS16190 alkylphosphonate utilization protein 0.53 HER17_RS01375 AbrB family transcriptional regulator low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS05390 alkylphosphonate utilization protein 0.53 HGI48_RS20025 AbrB family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.74 DZA65_RS05690 alkylphosphonate utilization protein 0.53 DZA65_RS21065 AbrB family transcriptional regulator — —
Dickeya dadantii 3937 0.73 DDA3937_RS05305 alkylphosphonate utilization protein 0.53 DDA3937_RS19870 AbrB family transcriptional regulator low > 74
Rahnella sp. WP5 0.73 EX31_RS19010 alkylphosphonate utilization protein 0.56 EX31_RS15190 AbrB family transcriptional regulator low > 89
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0863 PhnA protein 0.37 Psyr_3112 Putative ammonia monooxygenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0863 PhnA protein 0.37 Psyr_3112 Putative ammonia monooxygenase low > 86
Pantoea sp. MT58 0.72 IAI47_04280 alkylphosphonate utilization protein 0.52 IAI47_18380 AbrB family transcriptional regulator low > 76
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_2795 Alkylphosphonate utilization operon protein PhnA 0.09 Pf1N1B4_3310 Ammonia monooxygenase — —
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_15790 alkylphosphonate utilization protein 0.33 AO356_30250 hypothetical protein low > 104
Pseudomonas sp. RS175 0.67 PFR28_03774 hypothetical protein 0.08 PFR28_00678 hypothetical protein low > 88
Azospirillum brasilense Sp245 0.61 AZOBR_RS09590 putative Zn-ribbon-containing protein involved in phosphonate metabolism PhnA-like protein 0.12 AZOBR_RS12560 ammonia monooxygenase 0.32 63
Azospirillum sp. SherDot2 0.56 MPMX19_01079 hypothetical protein 0.41 MPMX19_05318 hypothetical protein low > 112
Rhodospirillum rubrum S1H 0.55 Rru_A1476 PhnA protein (NCBI) 0.41 Rru_A3334 Putative ammonia monooxygenase (NCBI) low > 58
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS12350 alkylphosphonate utilization protein 0.13 RR42_RS20605 membrane protein low > 128
Acidovorax sp. GW101-3H11 0.50 Ac3H11_4421 Alkylphosphonate utilization operon protein PhnA 0.09 Ac3H11_4503 Ammonia monooxygenase — —
Bosea sp. OAE506 0.36 ABIE41_RS12485 alkylphosphonate utilization protein 0.11 ABIE41_RS04375 AbrB family transcriptional regulator — —
Agrobacterium fabrum C58 0.35 Atu6108 alkylphosphonate uptake protein 0.12 Atu0200 hypothetical protein low > 89
Rhizobium sp. OAE497 0.34 ABIE40_RS22120 alkylphosphonate utilization protein 0.35 ABIE40_RS11630 AbrB family transcriptional regulator — —

Not shown: 36 genomes with orthologs for GFF1466 only; 2 genomes with orthologs for GFF4633 only