Conservation of cofitness between GFF3853 and GFF4345 in Hydrogenophaga sp. GW460-11-11-14-LB1

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF3853 DNA-binding protein HU-beta 1.0 GFF4345 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.70 12
Variovorax sp. SCN45 0.86 GFF2853 DNA-binding protein HU-beta 0.65 GFF220 tRNA pseudouridine(55) synthase (EC 5.4.99.25) low > 127
Variovorax sp. OAS795 0.86 ABID97_RS10665 HU family DNA-binding protein 0.65 ABID97_RS16475 tRNA pseudouridine(55) synthase TruB — —
Acidovorax sp. GW101-3H11 0.85 Ac3H11_376 DNA-binding protein HU-beta 0.58 Ac3H11_2865 tRNA pseudouridine synthase B (EC 4.2.1.70) low > 79
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS21970 HU family DNA-binding protein 0.45 QEN71_RS23090 tRNA pseudouridine(55) synthase TruB low > 153
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS09465 transcriptional regulator 0.46 BPHYT_RS08080 tRNA pseudouridine synthase B low > 109
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_00899 bacterial nucleoid protein Hbs 0.46 H281DRAFT_05106 tRNA pseudouridine synthase B — —
Dechlorosoma suillum PS 0.78 Dsui_2199 bacterial nucleoid DNA-binding protein 0.42 Dsui_2720 tRNA pseudouridine 55 synthase low > 51
Paraburkholderia graminis OAS925 0.78 ABIE53_002118 DNA-binding protein HU-beta 0.46 ABIE53_001832 tRNA pseudouridine55 synthase low > 113
Ralstonia solanacearum UW163 0.68 UW163_RS14645 HU family DNA-binding protein 0.46 UW163_RS13150 tRNA pseudouridine(55) synthase TruB — —
Ralstonia solanacearum PSI07 0.68 RPSI07_RS16140 HU family DNA-binding protein 0.47 RPSI07_RS17665 tRNA pseudouridine(55) synthase TruB — —
Ralstonia solanacearum GMI1000 0.68 RS_RS08660 HU family DNA-binding protein 0.46 RS_RS06470 tRNA pseudouridine(55) synthase TruB — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS01335 HU family DNA-binding protein 0.46 RALBFv3_RS15690 tRNA pseudouridine(55) synthase TruB — —
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS12780 HU family DNA-binding protein 0.47 ABZR87_RS11220 tRNA pseudouridine(55) synthase TruB low > 80
Alteromonas macleodii MIT1002 0.62 MIT1002_02756 hypothetical protein 0.34 MIT1002_01773 tRNA pseudouridine synthase B — —
Acinetobacter radioresistens SK82 0.59 MPMX26_01331 DNA-binding protein HU-beta 0.40 MPMX26_02778 tRNA pseudouridine synthase B — —
Azospirillum sp. SherDot2 0.59 MPMX19_01544 DNA-binding protein HU 0.29 MPMX19_02524 tRNA pseudouridine synthase B — —
Lysobacter sp. OAE881 0.58 ABIE51_RS14140 HU family DNA-binding protein 0.34 ABIE51_RS08405 tRNA pseudouridine(55) synthase TruB — —
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_0103 Bacterial nucleoid DNA-binding protein 0.28 Ga0059261_2142 tRNA pseudouridine(55) synthase — —
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS20390 DNA-binding protein 0.47 RR42_RS12835 tRNA pseudouridine synthase B — —
Rhizobium sp. OAE497 0.50 ABIE40_RS07105 DNA-binding protein HupB 0.27 ABIE40_RS00345 tRNA pseudouridine(55) synthase TruB low > 107
Bosea sp. OAE506 0.35 ABIE41_RS21840 HU family DNA-binding protein 0.28 ABIE41_RS04565 tRNA pseudouridine(55) synthase TruB — —

Not shown: 66 genomes with orthologs for GFF3853 only; 6 genomes with orthologs for GFF4345 only