Conservation of cofitness between Psest_1163 and Psest_3715 in Pseudomonas stutzeri RCH2

14 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1163 diguanylate cyclase (GGDEF) domain 1.0 Psest_3715 type IV pilus secretin (or competence protein) PilQ 0.50 14
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_05010 diguanylate cyclase 0.71 AO356_09395 fimbrial protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_2852 GGDEF domain/EAL domain protein 0.71 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ low > 103
Pseudomonas sp. RS175 0.71 PFR28_00605 hypothetical protein 0.70 PFR28_05011 Type 3 secretion system secretin low > 88
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1777 GGDEF domain/EAL domain protein 0.70 PfGW456L13_277 Type IV pilus biogenesis protein PilQ low > 87
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03970 diguanylate cyclase 0.73 AO353_12495 fimbrial protein low > 101
Pseudomonas sp. S08-1 0.70 OH686_07220 c-di-GMP phosphodiesterase 0.73 OH686_10025 Type IV pilus biogenesis protein PilQ low > 80
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_714 GGDEF domain/EAL domain protein 0.73 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ low > 87
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_4060 diguanylate cyclase/phosphodiesterase 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_4060 diguanylate cyclase/phosphodiesterase 0.74 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein low > 86
Marinobacter adhaerens HP15 0.43 HP15_2352 sensory box sensor/GGDEF/EAL domain protein 0.47 HP15_478 type 4 fimbrial biogenesis protein PilQ low > 73
Shewanella amazonensis SB2B 0.29 Sama_0965 GGDEF domain-containing protein (RefSeq) 0.32 Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) low > 62
Shewanella oneidensis MR-1 0.28 SO1208 GGDEF domain protein (NCBI ptt file) 0.33 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.27 Shew_2823 diguanylate cyclase/phosphodiesterase (RefSeq) 0.33 Shew_0212 type IV pilus secretin PilQ (RefSeq) low > 60
Shewanella sp. ANA-3 0.27 Shewana3_1034 diguanylate cyclase/phosphodiesterase (RefSeq) 0.33 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) low > 73

Not shown: 8 genomes with orthologs for Psest_1163 only; 20 genomes with orthologs for Psest_3715 only