Conservation of cofitness between PS417_04525 and PS417_15310 in Pseudomonas simiae WCS417

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04525 16S rRNA methyltransferase 1.0 PS417_15310 type VI secretion protein 0.28 9
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2953 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.70 Pf1N1B4_2086 Protein ImpG/VasA low > 87
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_14995 16S rRNA methyltransferase 0.69 AO353_09425 type VI secretion protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_06940 16S rRNA methyltransferase 0.66 AO356_12145 type VI secretion protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_3247 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.66 Pf6N2E2_4301 Protein ImpG/VasA low > 103
Pseudomonas sp. S08-1 0.77 OH686_06345 16S rRNA (guanine(1207)-N(2))-methyltransferase 0.64 OH686_12825 T6SS component TssF (ImpG/VasA) low > 80
Pseudomonas putida KT2440 0.73 PP_0761 Ribosomal RNA small subunit methyltransferase C 0.33 PP_4077 conserved protein of unknown function low > 96
Pseudomonas stutzeri RCH2 0.69 Psest_3224 16S RNA G1207 methylase RsmC 0.65 Psest_0127 type VI secretion protein, VC_A0110 family low > 67
Marinobacter adhaerens HP15 0.32 HP15_2266 rRNA (guanine-N(2)-)-methyltransferase 0.39 HP15_3473 type VI secretion system, VCA0110 low > 73
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_03280 16S rRNA methyltransferase 0.34 CSW01_14565 type VI secretion system baseplate subunit TssF low > 62
Erwinia tracheiphila SCR3 0.29 LU632_RS03750 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.33 LU632_RS17675 tssF type VI secretion system baseplate subunit TssF low > 74
Pantoea sp. MT58 0.28 IAI47_16375 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF low > 76
Escherichia coli Nissle 1917 0.28 ECOLIN_RS25090 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.22 ECOLIN_RS15765 type VI secretion system baseplate subunit TssF low > 52
Escherichia coli ECRC99 0.27 KEDOAH_16845 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.29 KEDOAH_18280 tssF Type VI secretion system protein TssF — —
Dickeya dadantii 3937 0.27 DDA3937_RS03190 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.33 DDA3937_RS07030 type VI secretion system baseplate subunit TssF low > 74
Enterobacter asburiae PDN3 0.27 EX28DRAFT_3579 16S RNA G1207 methylase RsmC 0.23 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family low > 76
Escherichia coli ECRC102 0.27 NIAGMN_09150 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.29 NIAGMN_07720 tssF Type VI secretion system protein TssF — —
Escherichia fergusonii Becca 0.27 EFB2_04076 Ribosomal RNA small subunit methyltransferase C 0.22 EFB2_01077 hypothetical protein low > 86
Escherichia coli ECOR27 0.27 NOLOHH_03620 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.29 NOLOHH_02230 tssF Type VI secretion system protein TssF low > 57
Escherichia coli ECRC98 0.27 JDDGAC_14895 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.29 JDDGAC_13470 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC101 0.27 MCAODC_01815 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.29 MCAODC_00390 tssF Type VI secretion system protein TssF — —
Escherichia coli ECRC101 0.27 OKFHMN_11300 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.29 OKFHMN_09870 tssF Type VI secretion system protein TssF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03691 Ribosomal RNA small subunit methyltransferase C 0.29 OHPLBJKB_03430 hypothetical protein low > 73
Enterobacter sp. TBS_079 0.27 MPMX20_00669 Ribosomal RNA small subunit methyltransferase C 0.22 MPMX20_01644 hypothetical protein low > 85
Dickeya dianthicola ME23 0.26 DZA65_RS03385 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.34 DZA65_RS08555 type VI secretion system baseplate subunit TssF low > 75
Dickeya dianthicola 67-19 0.26 HGI48_RS03340 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.33 HGI48_RS07960 type VI secretion system baseplate subunit TssF low > 71
Rahnella sp. WP5 0.26 EX31_RS04120 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF low > 89
Pectobacterium carotovorum WPP14 0.25 HER17_RS18080 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.34 HER17_RS04855 type VI secretion system baseplate subunit TssF low > 75

Not shown: 18 genomes with orthologs for PS417_04525 only; 2 genomes with orthologs for PS417_15310 only