Conservation of cofitness between PS417_20930 and PS417_14965 in Pseudomonas simiae WCS417

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20930 50S rRNA methyltransferase 1.0 PS417_14965 transcriptional regulator 0.49 6
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.97 PFLU_RS16995 response regulator low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.97 PFLU_RS16995 response regulator low > 109
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_00775 50S rRNA methyltransferase 0.88 AO353_22960 transcriptional regulator low > 101
Enterobacter asburiae PDN3 0.38 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase 0.43 EX28DRAFT_1549 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Enterobacter sp. TBS_079 0.38 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L 0.42 MPMX20_02026 Transcriptional regulatory protein RstA low > 85
Escherichia coli ECRC62 0.38 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 BNILDI_16960 rstA two-component system response regulator RstA low > 75
Dickeya dadantii 3937 0.38 DDA3937_RS12840 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.47 DDA3937_RS12230 two-component system response regulator RstA low > 74
Escherichia coli ECOR27 0.38 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 NOLOHH_18170 rstA two-component system response regulator RstA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 0.42 GFF1800 Transcriptional regulatory protein RstA low > 78
Klebsiella michiganensis M5al 0.38 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase 0.42 BWI76_RS16250 DNA-binding response regulator low > 92
Escherichia coli ECRC102 0.38 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 NIAGMN_00410 rstA two-component system response regulator RstA — —
Dickeya dianthicola ME23 0.38 DZA65_RS13375 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.47 DZA65_RS12760 two-component system response regulator RstA low > 75
Escherichia coli ECRC100 0.38 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 OKFHMN_27665 rstA two-component system response regulator RstA — —
Escherichia coli ECOR38 0.38 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 HEPCGN_06040 rstA two-component system response regulator RstA low > 87
Escherichia coli ECRC99 0.38 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 KEDOAH_00440 rstA two-component system response regulator RstA — —
Escherichia coli ECRC101 0.38 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 MCAODC_17745 rstA two-component system response regulator RstA low > 87
Dickeya dianthicola 67-19 0.38 HGI48_RS12910 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.47 HGI48_RS12320 two-component system response regulator RstA low > 71
Shewanella amazonensis SB2B 0.38 Sama_1600 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.45 Sama_2800 response regulator receiver protein (RefSeq) low > 62
Escherichia coli BW25113 0.38 b0948 ycbY predicted methyltransferase (NCBI) 0.44 b1608 rstA DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L 0.44 OHPLBJKB_02118 Transcriptional regulatory protein RstA low > 73
Escherichia fergusonii Becca 0.38 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L 0.44 EFB2_02384 Transcriptional regulatory protein RstA low > 86
Escherichia coli Nissle 1917 0.38 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 ECOLIN_RS08980 two-component system response regulator RstA — —
Pectobacterium carotovorum WPP14 0.38 HER17_RS11990 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.45 HER17_RS09695 two-component system response regulator RstA low > 75
Escherichia coli BL21 0.38 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent 0.44 ECD_01577 response regulator of RstAB two-component system low > 61
Erwinia tracheiphila SCR3 0.38 LU632_RS09965 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 LU632_RS11455 rstA two-component system response regulator RstA low > 74
Escherichia coli ECRC98 0.38 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.44 JDDGAC_02255 rstA two-component system response regulator RstA low > 86
Shewanella loihica PV-4 0.38 Shew_1812 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.47 Shew_0896 two component transcriptional regulator (RefSeq) low > 60
Serratia liquefaciens MT49 0.37 IAI46_08820 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.43 IAI46_13300 two-component system response regulator RstA low > 86
Shewanella oneidensis MR-1 0.37 SO1851 conserved hypothetical protein (NCBI ptt file) 0.47 SO3594 transcriptional regulatory protein RstA, putative (NCBI ptt file) low > 76
Pantoea sp. MT58 0.37 IAI47_12690 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.43 IAI47_09545 two-component system response regulator RstA low > 76
Shewanella sp. ANA-3 0.37 Shewana3_1601 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) 0.47 Shewana3_3184 two component transcriptional regulator (RefSeq) low > 73
Rahnella sp. WP5 0.37 EX31_RS18080 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.43 EX31_RS06520 two-component system response regulator RstA low > 89

Not shown: 21 genomes with orthologs for PS417_20930 only; 0 genomes with orthologs for PS417_14965 only