Conservation of cofitness between PS417_04525 and PS417_14960 in Pseudomonas simiae WCS417

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04525 16S rRNA methyltransferase 1.0 PS417_14960 ATPase 0.30 4
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS04570 class I SAM-dependent methyltransferase 0.95 PFLU_RS16990 HAMP domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.98 PFLU_RS04570 class I SAM-dependent methyltransferase 0.95 PFLU_RS16990 HAMP domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_14995 16S rRNA methyltransferase 0.79 AO353_22965 ATPase low > 101
Shewanella loihica PV-4 0.32 Shew_3230 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.21 Shew_0895 integral membrane sensor signal transduction histidine kinase (RefSeq) low > 60
Shewanella sp. ANA-3 0.29 Shewana3_3447 16S rRNA m(2)G 1207 methyltransferase (RefSeq) 0.21 Shewana3_3185 ATPase domain-containing protein (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.29 LU632_RS03750 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.25 LU632_RS11460 rstB two-component system sensor histidine kinase RstB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1031 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 0.26 GFF1804 Sensory histidine kinase in two-component regulatory system with RstA low > 78
Pantoea sp. MT58 0.28 IAI47_16375 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.25 IAI47_09540 two-component system sensor histidine kinase RstB low > 76
Escherichia coli BL21 0.28 ECD_04246 16S rRNA m(2)G1207 methyltransferase, SAM-dependent 0.23 ECD_01578 sensory histidine kinase of RstAB two-component system — —
Escherichia coli BW25113 0.28 b4371 rsmC 16S ribosomal RNA m2G1207 methyltransferase (NCBI) 0.24 b1609 rstB sensory histidine kinase in two-component regulatory system with RstA (NCBI) low > 76
Shewanella oneidensis MR-1 0.28 SO0828 conserved hypothetical protein (NCBI ptt file) 0.21 SO3595 sensor protein RstB, putative (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.28 IAI46_02860 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.25 IAI46_13305 two-component system sensor histidine kinase RstB low > 86
Escherichia coli Nissle 1917 0.28 ECOLIN_RS25090 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 ECOLIN_RS08985 two-component system sensor histidine kinase RstB low > 52
Escherichia coli ECRC99 0.27 KEDOAH_16845 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 KEDOAH_00445 rstB two-component system sensor histidine kinase RstB — —
Dickeya dadantii 3937 0.27 DDA3937_RS03190 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.23 DDA3937_RS12235 two-component system sensor histidine kinase RstB low > 74
Escherichia coli ECRC102 0.27 NIAGMN_09150 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 NIAGMN_00415 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli ECOR38 0.27 HEPCGN_09305 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 HEPCGN_06035 rstB two-component system sensor histidine kinase RstB low > 85
Escherichia coli ECRC101 0.27 OKFHMN_11300 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 OKFHMN_27660 rstB two-component system sensor histidine kinase RstB — —
Escherichia fergusonii Becca 0.27 EFB2_04076 Ribosomal RNA small subunit methyltransferase C 0.24 EFB2_02383 Sensor protein RstB low > 86
Escherichia coli ECRC101 0.27 MCAODC_01815 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 MCAODC_17750 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli ECRC98 0.27 JDDGAC_14895 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 JDDGAC_02250 rstB two-component system sensor histidine kinase RstB — —
Escherichia coli ECOR27 0.27 NOLOHH_03620 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 NOLOHH_18165 rstB two-component system sensor histidine kinase RstB — —
Enterobacter asburiae PDN3 0.27 EX28DRAFT_3579 16S RNA G1207 methylase RsmC 0.26 EX28DRAFT_1606 Signal transduction histidine kinase low > 76
Klebsiella michiganensis M5al 0.27 BWI76_RS04080 16S rRNA (guanine(1207)-N(2))-methyltransferase 0.26 BWI76_RS16260 two-component sensor histidine kinase low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03691 Ribosomal RNA small subunit methyltransferase C 0.23 OHPLBJKB_02117 Sensor protein RstB low > 73
Escherichia coli ECRC62 0.27 BNILDI_07980 rsmC 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.24 BNILDI_16955 rstB two-component system sensor histidine kinase RstB — —
Enterobacter sp. TBS_079 0.27 MPMX20_00669 Ribosomal RNA small subunit methyltransferase C 0.25 MPMX20_02024 Sensor protein RstB low > 85
Dickeya dianthicola ME23 0.26 DZA65_RS03385 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.23 DZA65_RS12765 two-component system sensor histidine kinase RstB low > 75
Shewanella amazonensis SB2B 0.26 Sama_0569 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.21 Sama_2801 sensor protein RstB, putative (RefSeq) low > 62
Dickeya dianthicola 67-19 0.26 HGI48_RS03340 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.23 HGI48_RS12325 two-component system sensor histidine kinase RstB low > 71
Rahnella sp. WP5 0.26 EX31_RS04120 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.23 EX31_RS06515 two-component system sensor histidine kinase RstB low > 89
Pectobacterium carotovorum WPP14 0.25 HER17_RS18080 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.23 HER17_RS09690 two-component system sensor histidine kinase RstB low > 75

Not shown: 13 genomes with orthologs for PS417_04525 only; 9 genomes with orthologs for PS417_14960 only