Conservation of cofitness between Psest_3008 and Psest_2625 in Pseudomonas stutzeri RCH2

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3008 cobyric acid synthase CobQ 1.0 Psest_2625 Flp pilus assembly protein, secretin CpaC 0.19 12
Pseudomonas sp. S08-1 0.80 OH686_04965 cobyric acid synthase CobQ 0.65 OH686_02550 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly low > 80
Shewanella loihica PV-4 0.61 Shew_0717 cobyric acid synthase (RefSeq) 0.12 Shew_0645 type II and III secretion system protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.57 Sama_0765 cobyric acid synthase (RefSeq) 0.13 Sama_0707 putative type II and III secretion system outermembrane protein, secretin (RefSeq) low > 62
Caulobacter crescentus NA1000 0.47 CCNA_02776 cobyric acid synthase CobQ 0.21 CCNA_03040 outer membrane pilus secretion channel CpaC low > 66
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_02776 cobyric acid synthase CobQ 0.21 CCNA_03040 outer membrane pilus secretion channel CpaC low > 67
Magnetospirillum magneticum AMB-1 0.46 AMB_RS01485 cobyric acid synthase 0.23 AMB_RS18935 Flp pilus assembly protein, secretin CpaC — —
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_0630 adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10) 0.22 Ga0059261_3243 Flp pilus assembly protein, secretin CpaC low > 68
Sinorhizobium meliloti 1021 0.43 SMc04309 cobyric acid synthase 0.23 SMa0163 PilQ2 pilus assembly protein — —
Rhodopseudomonas palustris CGA009 0.43 TX73_003715 cobyric acid synthase 0.23 TX73_019060 type II and III secretion system protein family protein low > 86
Rhizobium sp. OAE497 0.43 ABIE40_RS11175 cobyric acid synthase 0.19 ABIE40_RS00870 type II and III secretion system protein family protein low > 107
Phaeobacter inhibens DSM 17395 0.41 PGA1_c24000 cobyric acid synthase CobQ 0.29 PGA1_c06140 putative bacterial type II/III secretion system protein — —
Dinoroseobacter shibae DFL-12 0.41 Dshi_2096 cobyric acid synthase CobQ (RefSeq) 0.30 Dshi_1129 type II and III secretion system protein (RefSeq) — —
Agrobacterium fabrum C58 0.40 Atu2808 cobyric acid synthase 0.21 Atu0221 component of type IV pilus low > 89
Bosea sp. OAE506 0.39 ABIE41_RS03845 cobyric acid synthase 0.19 ABIE41_RS03700 type II and III secretion system protein family protein — —
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU0816 cobQ cobyric acid synthase CobQ (TIGR) 0.31 DVU2119 cpaC type II/III secretion system protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_2864 cobyric acid synthase (RefSeq) 0.28 DvMF_2741 type II and III secretion system protein (RefSeq) — —
Variovorax sp. OAS795 0.32 ABID97_RS17340 cobyric acid synthase 0.25 ABID97_RS09065 type II and III secretion system protein family protein low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF3998 Cobyric acid synthase (EC 6.3.5.10) 0.17 GFF4123 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly low > 90

Not shown: 45 genomes with orthologs for Psest_3008 only; 3 genomes with orthologs for Psest_2625 only