Conservation of cofitness between PS417_23415 and PS417_12610 in Pseudomonas simiae WCS417

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_23415 AraC family transcriptional regulator 1.0 PS417_12610 RNA polymerase sigma factor 0.36 4
Pseudomonas fluorescens SBW25 0.98 PFLU_RS25245 helix-turn-helix transcriptional regulator 0.92 PFLU_RS13305 sigma-70 family RNA polymerase sigma factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS25245 helix-turn-helix transcriptional regulator 0.92 PFLU_RS13305 sigma-70 family RNA polymerase sigma factor low > 109
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_04870 AraC family transcriptional regulator 0.28 AO353_07625 RNA polymerase subunit sigma-70 low > 101
Pseudomonas syringae pv. syringae B728a 0.77 Psyr_1041 transcriptional regulator, AraC family 0.68 Psyr_0362 Sigma-70 region 2 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.77 Psyr_1041 transcriptional regulator, AraC family 0.68 Psyr_0362 Sigma-70 region 2 low > 86
Pseudomonas putida KT2440 0.71 PP_4605 Transcriptional regulator, AraC family 0.59 PP_3006 RNA polymerase sigma-70 factor, ECF subfamily low > 96
Pseudomonas sp. S08-1 0.67 OH686_07125 Transcriptional regulator, AraC family 0.22 OH686_11525 hypothetical protein low > 80
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS19200 AraC family transcriptional regulator 0.34 ABZR87_RS16160 sigma-70 family RNA polymerase sigma factor low > 80
Ralstonia solanacearum GMI1000 0.43 RS_RS22710 AraC family transcriptional regulator 0.30 RS_RS11855 DNA-directed RNA polymerase sigma-70 factor low > 80
Ralstonia solanacearum PSI07 0.43 RPSI07_RS05325 AraC family transcriptional regulator 0.33 RPSI07_RS13090 DNA-directed RNA polymerase sigma-70 factor low > 81
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS34420 AraC family transcriptional regulator 0.34 BPHYT_RS21845 hypothetical protein low > 109
Ralstonia solanacearum UW163 0.43 UW163_RS20855 AraC family transcriptional regulator 0.32 UW163_RS09400 DNA-directed RNA polymerase sigma-70 factor — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS18275 AraC family transcriptional regulator 0.32 RALBFv3_RS04270 DNA-directed RNA polymerase sigma-70 factor low > 76
Rahnella sp. WP5 0.32 EX31_RS12055 helix-turn-helix domain-containing protein 0.29 EX31_RS18905 sigma-70 family RNA polymerase sigma factor low > 89
Enterobacter asburiae PDN3 0.32 EX28DRAFT_1225 Helix-turn-helix domain 0.32 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family low > 76
Pantoea sp. MT58 0.32 IAI47_05640 helix-turn-helix transcriptional regulator 0.29 IAI47_19735 sigma-70 family RNA polymerase sigma factor low > 76
Marinobacter adhaerens HP15 0.25 HP15_2741 transcriptional regulator, AraC family protein 0.40 HP15_p187g100 RNA polymerase sigma factor 0.25 66
Dinoroseobacter shibae DFL-12 0.16 Dshi_2282 transcriptional regulator, AraC family (RefSeq) 0.23 Dshi_0366 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) low > 64

Not shown: 16 genomes with orthologs for PS417_23415 only; 25 genomes with orthologs for PS417_12610 only