Conservation of cofitness between PS417_01280 and PS417_06730 in Pseudomonas simiae WCS417

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_01280 peptidoglycan-binding protein LysM 1.0 PS417_06730 3-carboxy-cis,cis-muconate cycloisomerase 0.16 14
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS01375 peptidoglycan-binding protein LysM 0.96 PFLU_RS06755 3-carboxy-cis,cis-muconate cycloisomerase low > 109
Pseudomonas fluorescens SBW25 0.88 PFLU_RS01375 peptidoglycan-binding protein LysM 0.96 PFLU_RS06755 3-carboxy-cis,cis-muconate cycloisomerase low > 109
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_406 FIG00954962: hypothetical protein 0.83 PfGW456L13_4586 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2)
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_10090 peptidoglycan-binding protein LysM 0.80 AO356_04910 3-carboxy-cis,cis-muconate cycloisomerase 0.23 53
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_1671 FIG00954962: hypothetical protein 0.83 Pf1N1B4_3237 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) low > 87
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_3888 FIG00954962: hypothetical protein 0.80 Pf6N2E2_2831 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2) low > 103
Pseudomonas putida KT2440 0.82 PP_0258 regulator of murein cross-linking 0.77 PP_1379 3-carboxy-cis,cis-muconate cycloisomerase low > 96
Pseudomonas sp. RS175 0.78 PFR28_04884 Potassium binding protein Kbp 0.80 PFR28_00626 3-carboxy-cis,cis-muconate cycloisomerase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_4943 Peptidoglycan-binding LysM:Transport-associated 0.76 Psyr_2125 3-carboxy-cis,cis-muconate cycloisomerase
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_4943 Peptidoglycan-binding LysM:Transport-associated 0.76 Psyr_2125 3-carboxy-cis,cis-muconate cycloisomerase
Serratia liquefaciens MT49 0.57 IAI46_14930 peptidoglycan-binding protein LysM 0.49 IAI46_12820 3-carboxy-cis,cis-muconate cycloisomerase low > 86
Klebsiella michiganensis M5al 0.49 BWI76_RS14560 peptidoglycan-binding protein LysM 0.47 BWI76_RS16130 3-carboxy-cis,cis-muconate cycloisomerase low > 92
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS15185 peptidoglycan-binding protein LysM 0.48 ABZR87_RS15785 3-carboxy-cis,cis-muconate cycloisomerase low > 80
Ralstonia solanacearum GMI1000 0.41 RS_RS10770 peptidoglycan-binding protein LysM 0.43 RS_RS11300 3-carboxy-cis,cis-muconate cycloisomerase low > 80
Ralstonia solanacearum PSI07 0.41 RPSI07_RS13905 peptidoglycan-binding protein LysM 0.44 RPSI07_RS13375 3-carboxy-cis,cis-muconate cycloisomerase
Ralstonia solanacearum UW163 0.41 UW163_RS10440 peptidoglycan-binding protein LysM 0.43 UW163_RS09815 3-carboxy-cis,cis-muconate cycloisomerase
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS03285 peptidoglycan-binding protein LysM 0.43 RALBFv3_RS03855 3-carboxy-cis,cis-muconate cycloisomerase low > 76
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00784 Nucleoid-associated protein YgaU, contains BON and LysM domains 0.46 H281DRAFT_01595 3-carboxy-cis,cis-muconate cycloisomerase low > 103
Bosea sp. OAE506 0.38 ABIE41_RS13130 peptidoglycan-binding protein LysM 0.37 ABIE41_RS13685 3-carboxy-cis,cis-muconate cycloisomerase low > 77
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS05460 peptidase M23 0.47 RR42_RS32055 3-carboxymuconate cycloisomerase PcaB (EC 5.5.1.2) (from data) low > 128

Not shown: 21 genomes with orthologs for PS417_01280 only; 12 genomes with orthologs for PS417_06730 only