Conservation of cofitness between GFF2172 and GFF1302 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF2172 Uracil permease 1.0 GFF1302 Protease III precursor (EC 3.4.24.55) 0.52 16
Klebsiella michiganensis M5al 0.95 BWI76_RS20940 uracil/xanthine transporter 0.84 BWI76_RS23235 pitrilysin low > 92
Enterobacter sp. TBS_079 0.95 MPMX20_03351 Uracil permease 0.84 MPMX20_03684 Protease 3 low > 85
Escherichia coli ECRC100 0.95 OKFHMN_21820 uraA uracil permease 0.90 OKFHMN_20045 ptrA pitrilysin low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_01229 Uracil permease 0.90 OHPLBJKB_00909 Protease 3 low > 73
Escherichia coli BL21 0.95 ECD_02389 uracil permease 0.91 ECD_02669 protease III low > 61
Escherichia coli ECRC101 0.95 MCAODC_12350 uraA uracil permease 0.90 MCAODC_10570 ptrA pitrilysin low > 87
Escherichia coli ECRC99 0.95 KEDOAH_06400 uraA uracil permease 0.90 KEDOAH_08085 ptrA pitrilysin — —
Escherichia coli ECOR27 0.95 NOLOHH_13470 uraA uracil permease 0.90 NOLOHH_11930 ptrA pitrilysin low > 75
Escherichia fergusonii Becca 0.95 EFB2_01401 Uracil permease 0.91 EFB2_01063 Protease 3 low > 86
Escherichia coli ECRC102 0.95 NIAGMN_19590 uraA uracil permease 0.90 NIAGMN_17815 ptrA pitrilysin — —
Escherichia coli ECRC98 0.95 JDDGAC_25765 uraA uracil permease 0.90 JDDGAC_23710 ptrA pitrilysin low > 86
Escherichia coli BW25113 0.95 b2497 uraA uracil transporter (NCBI) 0.90 b2821 ptr protease III (NCBI) low > 76
Escherichia coli ECRC62 0.95 BNILDI_12280 uraA uracil permease 0.90 BNILDI_10410 ptrA pitrilysin low > 75
Escherichia coli Nissle 1917 0.95 ECOLIN_RS14180 uracil permease 0.91 ECOLIN_RS15835 pitrilysin low > 55
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0171 uracil-xanthine permease 0.83 EX28DRAFT_2896 Secreted/periplasmic Zn-dependent peptidases, insulinase-like low > 76
Escherichia coli ECOR38 0.95 HEPCGN_20985 uraA uracil permease 0.90 HEPCGN_19300 ptrA pitrilysin low > 87
Pantoea sp. MT58 0.90 IAI47_05190 uracil permease 0.64 IAI47_03960 pitrilysin low > 76
Serratia liquefaciens MT49 0.89 IAI46_18875 uracil permease 0.67 IAI46_20410 pitrilysin low > 86
Pectobacterium carotovorum WPP14 0.88 HER17_RS15455 uracil permease 0.64 HER17_RS16530 pitrilysin low > 75
Dickeya dadantii 3937 0.87 DDA3937_RS06035 uracil permease 0.63 DDA3937_RS04985 pitrilysin low > 74
Erwinia tracheiphila SCR3 0.87 LU632_RS08290 uraA uracil permease 0.65 LU632_RS06185 ptrA pitrilysin low > 74
Rahnella sp. WP5 0.86 EX31_RS22705 uracil permease 0.62 EX31_RS13165 pitrilysin low > 89
Dickeya dianthicola ME23 0.85 DZA65_RS06430 uracil permease 0.62 DZA65_RS05335 pitrilysin low > 75
Dickeya dianthicola 67-19 0.85 HGI48_RS06080 uracil permease 0.62 HGI48_RS04995 pitrilysin low > 71
Marinobacter adhaerens HP15 0.33 HP15_2307 xanthine/uracil permease 0.19 HP15_1211 protease III precursor low > 73
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_10810 uracil permease 0.17 CSW01_10360 peptidase M16 low > 62
Shewanella amazonensis SB2B 0.31 Sama_1918 uracil-xanthine permease (RefSeq) 0.18 Sama_2163 M16 family peptidase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.30 SO2879 uraA uracil permease (NCBI ptt file) 0.17 SO3083 peptidase, M16 family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.30 Shewana3_1641 uracil-xanthine permease (RefSeq) 0.18 Shewana3_1465 peptidase M16 domain-containing protein (RefSeq) low > 73
Shewanella loihica PV-4 0.30 Shew_1836 uracil-xanthine permease (RefSeq) 0.17 Shew_2420 peptidase M16 domain-containing protein (RefSeq) low > 60

Not shown: 39 genomes with orthologs for GFF2172 only; 1 genomes with orthologs for GFF1302 only