Conservation of cofitness between PS417_10540 and PS417_06100 in Pseudomonas simiae WCS417

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_10540 NAD-dependent deacetylase 1.0 PS417_06100 SAM-dependent methyltransferase 0.22 1
Pseudomonas fluorescens SBW25 0.88 PFLU_RS10600 NAD-dependent protein deacetylase 0.90 PFLU_RS06170 ribosomal RNA small subunit methyltransferase J low > 109
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS10600 NAD-dependent protein deacetylase 0.90 PFLU_RS06170 ribosomal RNA small subunit methyltransferase J low > 109
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_21660 NAD-dependent deacetylase 0.83 AO356_06145 SAM-dependent methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family 0.83 Pf6N2E2_3094 SAM-dependent methyltransferase (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_26795 NAD-dependent deacetylase 0.87 AO353_16350 SAM-dependent methyltransferase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2362 Silent information regulator protein Sir2 0.74 Psyr_1325 Protein of unknown function DUF548 — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2362 Silent information regulator protein Sir2 0.74 Psyr_1325 Protein of unknown function DUF548 — —
Marinobacter adhaerens HP15 0.39 HP15_2625 silent information regulator protein Sir2 0.48 HP15_800 protein YhiQ low > 73
Pseudomonas stutzeri RCH2 0.19 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 0.66 Psest_1563 Protein of unknown function (DUF548). low > 67
Pseudomonas sp. S08-1 0.17 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.69 OH686_06755 16S rRNA (guanine(1516)-N(2))-methyltransferase low > 80
Pseudomonas putida KT2440 0.17 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.70 PP_1513 Ribosomal RNA small subunit methyltransferase J low > 96
Alteromonas macleodii MIT1002 0.15 MIT1002_02145 NAD-dependent protein deacylase 0.39 MIT1002_00112 Ribosomal RNA small subunit methyltransferase J low > 70
Pectobacterium carotovorum WPP14 0.13 HER17_RS08800 NAD-dependent protein deacylase 0.36 HER17_RS21305 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.36 GFF518 rRNA small subunit methyltransferase J low > 78
Shewanella sp. ANA-3 0.13 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.43 Shewana3_4037 hypothetical protein (RefSeq) — —
Shewanella loihica PV-4 0.13 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.44 Shew_3647 hypothetical protein (RefSeq) low > 60
Escherichia fergusonii Becca 0.13 EFB2_02855 NAD-dependent protein deacylase 0.36 EFB2_00318 Ribosomal RNA small subunit methyltransferase J low > 86
Escherichia coli Nissle 1917 0.13 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 0.36 ECOLIN_RS19980 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli BL21 0.13 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 0.36 ECD_03346 16S rRNA m(2)G1516 methyltransferase, SAM-dependent low > 60
Escherichia coli ECRC98 0.13 JDDGAC_07100 cobB NAD-dependent protein deacylase 0.37 JDDGAC_20050 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_02546 NAD-dependent protein deacylase 0.36 OHPLBJKB_00206 Ribosomal RNA small subunit methyltransferase J low > 73
Escherichia coli ECOR38 0.13 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.36 HEPCGN_15330 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ low > 85
Escherichia coli ECRC102 0.13 NIAGMN_24390 cobB NAD-dependent protein deacylase 0.36 NIAGMN_14185 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECRC62 0.13 BNILDI_19130 cobB NAD-dependent protein deacylase 0.36 BNILDI_03205 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECRC101 0.13 OKFHMN_03440 cobB NAD-dependent protein deacylase 0.36 OKFHMN_16420 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECRC99 0.13 KEDOAH_24315 cobB NAD-dependent protein deacylase 0.36 KEDOAH_11725 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECRC101 0.13 MCAODC_22800 cobB NAD-dependent protein deacylase 0.36 MCAODC_06935 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli ECOR27 0.13 NOLOHH_20965 cobB NAD-dependent protein deacylase 0.36 NOLOHH_08355 rsmJ 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ — —
Escherichia coli BW25113 0.12 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 0.36 b3497 yhiQ predicted SAM-dependent methyltransferase (NCBI) low > 76
Shewanella amazonensis SB2B 0.12 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.44 Sama_3564 hypothetical protein (RefSeq) low > 62

Not shown: 43 genomes with orthologs for PS417_10540 only; 12 genomes with orthologs for PS417_06100 only