Conservation of cofitness between GFF3555 and GFF1046 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF3555 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (EC 3.1.2.28) in menaquinone biosynthesis 1.0 GFF1046 Purine nucleoside phosphorylase (EC 2.4.2.1) 0.47 20
Escherichia coli ECOR38 0.93 HEPCGN_05620 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 HEPCGN_09220 deoD purine-nucleoside phosphorylase low > 87
Escherichia coli ECOR27 0.93 NOLOHH_17755 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 NOLOHH_03545 deoD purine-nucleoside phosphorylase low > 75
Escherichia fergusonii Becca 0.93 EFB2_02306 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 EFB2_04062 Purine nucleoside phosphorylase DeoD-type low > 86
Escherichia coli Nissle 1917 0.93 ECOLIN_RS09425 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 ECOLIN_RS25165 purine-nucleoside phosphorylase
Escherichia coli BL21 0.92 ECD_01655 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 ECD_04260 purine nucleoside phosphorylase 1; nicotinamide 1-beta-D-riboside phosphorylase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_02038 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 OHPLBJKB_03677 Purine nucleoside phosphorylase DeoD-type low > 73
Escherichia coli BW25113 0.92 b1686 ydiI hypothetical protein (NCBI) 0.97 b4384 deoD purine nucleoside phosphorylase (NCBI) low > 76
Escherichia coli ECRC62 0.92 BNILDI_16545 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 BNILDI_08050 deoD purine-nucleoside phosphorylase low > 75
Escherichia coli ECRC99 0.91 KEDOAH_00875 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 KEDOAH_16935 deoD purine-nucleoside phosphorylase
Escherichia coli ECRC101 0.91 MCAODC_18175 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 MCAODC_01730 deoD purine-nucleoside phosphorylase low > 87
Escherichia coli ECRC102 0.91 NIAGMN_00830 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 NIAGMN_09065 deoD purine-nucleoside phosphorylase
Escherichia coli ECRC98 0.91 JDDGAC_01810 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 JDDGAC_14810 deoD purine-nucleoside phosphorylase low > 86
Escherichia coli ECRC100 0.91 OKFHMN_27235 menI 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 OKFHMN_11215 deoD purine-nucleoside phosphorylase low > 80
Enterobacter sp. TBS_079 0.88 MPMX20_01927 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.97 MPMX20_00683 Purine nucleoside phosphorylase DeoD-type low > 85
Enterobacter asburiae PDN3 0.87 EX28DRAFT_1695 uncharacterized domain 1 0.96 EX28DRAFT_3593 purine-nucleoside phosphorylase, family 1 (deoD) low > 76
Klebsiella michiganensis M5al 0.85 BWI76_RS17045 hypothetical protein 0.96 BWI76_RS04145 purine-nucleoside phosphorylase low > 92
Serratia liquefaciens MT49 0.76 IAI46_11135 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.87 IAI46_02925 purine-nucleoside phosphorylase low > 86
Pectobacterium carotovorum WPP14 0.73 HER17_RS08910 1,4-dihydroxy-2-naphthoyl-CoA hydrolase 0.90 HER17_RS18120 purine-nucleoside phosphorylase low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS12790 hotdog fold thioesterase 0.93 DDA3937_RS03150 purine-nucleoside phosphorylase low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS13320 hotdog fold thioesterase 0.92 DZA65_RS03320 purine-nucleoside phosphorylase low > 75
Dickeya dianthicola 67-19 0.72 HGI48_RS12855 hotdog fold thioesterase 0.92 HGI48_RS03325 purine-nucleoside phosphorylase
Erwinia tracheiphila SCR3 0.71 LU632_RS11045 hotdog fold thioesterase 0.90 LU632_RS02530 deoD purine-nucleoside phosphorylase low > 74
Rahnella sp. WP5 0.69 EX31_RS13920 hotdog fold thioesterase 0.93 EX31_RS04050 purine-nucleoside phosphorylase low > 89
Echinicola vietnamensis KMM 6221, DSM 17526 0.57 Echvi_2346 uncharacterized domain 1 0.11 Echvi_1798 Uridine phosphorylase low > 79
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_17125 esterase 0.79 CSW01_11895 purine-nucleoside phosphorylase low > 62
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS06895 hotdog fold thioesterase 0.48 LRK54_RS13940 purine-nucleoside phosphorylase low > 59
Rhodanobacter denitrificans MT42 0.49 LRK55_RS06640 hotdog fold thioesterase 0.48 LRK55_RS13660 purine-nucleoside phosphorylase
Shewanella loihica PV-4 0.41 Shew_3192 hypothetical protein (RefSeq) 0.72 Shew_2812 deoD purine nucleoside phosphorylase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.41 Sama_2944 hypothetical protein (RefSeq) 0.73 Sama_0976 deoD purine nucleoside phosphorylase (RefSeq) low > 62
Shewanella sp. ANA-3 0.40 Shewana3_0906 hypothetical protein (RefSeq) 0.72 Shewana3_1044 deoD purine nucleoside phosphorylase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO1068 conserved hypothetical protein (NCBI ptt file) 0.73 SO1221 deoD-2 purine nucleoside phosphorylase (NCBI ptt file) low > 76

Not shown: 27 genomes with orthologs for GFF3555 only; 4 genomes with orthologs for GFF1046 only