Conservation of cofitness between EX31_RS17905 and EX31_RS06745 in Rahnella sp. WP5

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS17905 HTH-type transcriptional regulator PuuR 1.0 EX31_RS06745 ABC transporter permease 0.31 5
Serratia liquefaciens MT49 0.81 IAI46_10550 HTH-type transcriptional regulator PuuR 0.23 IAI46_23535 taurine ABC transporter permease TauC low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_1500 Predicted transcriptional regulators 0.21 EX28DRAFT_2604 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS10700 XRE family transcriptional regulator 0.21 BWI76_RS06075 taurine transporter subunit low > 92
Escherichia coli ECRC99 0.79 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR 0.20 KEDOAH_19280 tauC taurine ABC transporter permease TauC — —
Escherichia coli ECRC98 0.79 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR 0.20 JDDGAC_12345 tauC taurine ABC transporter permease TauC low > 86
Escherichia coli ECRC102 0.79 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR 0.20 NIAGMN_06745 tauC taurine ABC transporter permease TauC — —
Escherichia coli ECRC101 0.79 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR 0.20 MCAODC_27920 tauC taurine ABC transporter permease TauC low > 87
Escherichia coli ECRC100 0.79 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR 0.20 OKFHMN_08690 tauC taurine ABC transporter permease TauC low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR 0.20 OHPLBJKB_03307 Putative aliphatic sulfonates transport permease protein SsuC low > 73
Escherichia coli BL21 0.79 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.20 ECD_00317 taurine ABC transporter permease low > 61
Escherichia coli ECOR27 0.79 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR 0.20 NOLOHH_01615 tauC taurine ABC transporter permease TauC low > 75
Escherichia coli ECRC62 0.79 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR 0.20 BNILDI_23030 tauC taurine ABC transporter permease TauC low > 75
Pantoea sp. MT58 0.68 IAI47_07115 HTH-type transcriptional regulator PuuR 0.23 IAI47_02010 taurine ABC transporter permease TauC low > 76
Pseudomonas stutzeri RCH2 0.40 Psest_3791 Predicted transcriptional regulators 0.34 Psest_2364 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component low > 67
Pseudomonas sp. RS175 0.37 PFR28_04396 HTH-type transcriptional regulator PuuR 0.24 PFR28_04862 Putative aliphatic sulfonates transport permease protein SsuC low > 88
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_09140 XRE family transcriptional regulator 0.32 AO353_15050 nitrate transport permease nrtB low > 101
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_815 Putrescine utilization regulator 0.32 PfGW456L13_1400 Urea carboxylase-related ABC transporter, permease protein low > 87
Pseudomonas putida KT2440 0.37 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine 0.25 PP_0231 taurine ABC transporter permease subunit low > 96
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4394 Putrescine utilization regulator 0.28 Pf6N2E2_3911 Taurine transport system permease protein TauC low > 103
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_12635 XRE family transcriptional regulator 0.27 AO356_10200 taurine ABC transporter permease low > 104
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS29365 cupin domain-containing protein 0.26 PFLU_RS01250 taurine ABC transporter permease TauC low > 109
Pseudomonas fluorescens SBW25 0.36 PFLU_RS29365 cupin domain-containing protein 0.26 PFLU_RS01250 taurine ABC transporter permease TauC low > 109
Pseudomonas simiae WCS417 0.36 PS417_27690 XRE family transcriptional regulator 0.26 PS417_01140 taurine ABC transporter permease low > 88
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_2147 Putrescine utilization regulator 0.26 Pf1N1B4_1766 Taurine transport system permease protein TauC low > 87
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS23170 XRE family transcriptional regulator 0.25 BPHYT_RS25965 nitrate ABC transporter permease low > 109
Bosea sp. OAE506 0.31 ABIE41_RS05345 cupin domain-containing protein 0.61 ABIE41_RS23690 ABC transporter permease low > 77
Azospirillum brasilense Sp245 0.29 AZOBR_RS19640 aldehyde dehydrogenase 0.50 AZOBR_RS00425 ABC transporter permease low > 97
Agrobacterium fabrum C58 0.28 Atu3328 aldehyde dehydrogenase 0.56 Atu0158 ABC transporter, membrane spanning protein low > 89

Not shown: 15 genomes with orthologs for EX31_RS17905 only; 11 genomes with orthologs for EX31_RS06745 only