Conservation of cofitness between ECD_00078 and ECD_04049 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00078 global transcription factor 1.0 ECD_04049 PspA/IM30 family protein low > 61
Escherichia coli BW25113 1.00 b0076 leuO probable transcriptional activator for leuABCD operon (VIMSS) 1.00 b4182 yjfJ predicted transcriptional regulator effector protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03582 HTH-type transcriptional regulator LeuO 0.99 OHPLBJKB_03860 hypothetical protein low > 73
Escherichia coli ECRC62 1.00 BNILDI_08560 leuO transcriptional regulator LeuO 1.00 BNILDI_07020 yjfJ Uncharacterized protein YjfJ low > 75
Escherichia fergusonii Becca 0.99 EFB2_03970 HTH-type transcriptional regulator LeuO 1.00 EFB2_04353 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS00410 transcriptional regulator LeuO 1.00 ECOLIN_RS24280 PspA/IM30 family protein — —
Escherichia coli ECRC102 0.99 NIAGMN_08555 leuO transcriptional regulator LeuO 0.99 NIAGMN_10055 yjfJ Uncharacterized protein YjfJ — —
Escherichia coli ECRC101 0.99 MCAODC_01220 leuO transcriptional regulator LeuO 0.99 MCAODC_02720 yjfJ Uncharacterized protein YjfJ low > 87
Escherichia coli ECRC99 0.99 KEDOAH_17450 leuO transcriptional regulator LeuO 0.99 KEDOAH_15950 yjfJ Uncharacterized protein YjfJ — —
Escherichia coli ECOR27 0.99 NOLOHH_03050 leuO transcriptional regulator LeuO 1.00 NOLOHH_04470 yjfJ Uncharacterized protein YjfJ low > 75
Escherichia coli ECRC98 0.99 JDDGAC_14300 leuO transcriptional regulator LeuO 0.99 JDDGAC_15845 yjfJ Uncharacterized protein YjfJ low > 86
Escherichia coli ECRC100 0.99 OKFHMN_10705 leuO transcriptional regulator LeuO 0.99 OKFHMN_12205 yjfJ Uncharacterized protein YjfJ low > 80
Escherichia coli ECOR38 0.99 HEPCGN_08685 leuO transcriptional regulator LeuO 1.00 HEPCGN_10435 yjfJ Uncharacterized protein YjfJ low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF162 Probable transcriptional activator for leuABCD operon 0.89 GFF835 PspA/IM30 family protein low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_2473 transcriptional regulator, LysR family 0.26 Psyr_1693 PspA/IM30 — —
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_2473 transcriptional regulator, LysR family 0.26 Psyr_1693 PspA/IM30 — —
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_01560 LysR family transcriptional regulator 0.26 AO356_15050 phage shock protein A low > 104
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_3992 Transcriptional regulator, LysR family 0.26 Pf1N1B4_2621 PspA/IM30 family protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2187 Transcriptional regulator, LysR family 0.26 Pf6N2E2_4943 PspA/IM30 family protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_20375 LysR family transcriptional regulator 0.25 AO353_06810 phage shock protein A low > 101
Shewanella oneidensis MR-1 0.20 SO1607 transcriptional regulator, LysR family (NCBI ptt file) 0.21 SO3765 conserved hypothetical protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.20 MIT1002_01758 HTH-type transcriptional regulator LeuO 0.27 MIT1002_02817 PspA/IM30 family protein low > 70
Variovorax sp. SCN45 0.20 GFF4989 Transcriptional regulator, LysR family 0.18 GFF6437 no description low > 127
Pseudomonas sp. S08-1 0.20 OH686_00880 Transcriptional regulator, LysR family 0.22 OH686_06995 PspA/IM30 family protein low > 80
Shewanella loihica PV-4 0.19 Shew_2857 LysR family transcriptional regulator (RefSeq) 0.22 Shew_0623 phage shock protein A, PspA (RefSeq) low > 60
Acidovorax sp. GW101-3H11 0.19 Ac3H11_4841 FIG000557: hypothetical protein co-occurring with RecR 0.19 Ac3H11_3936 PspA/IM30 family protein low > 79
Shewanella amazonensis SB2B 0.17 Sama_2520 putative transcriptional regulator (RefSeq) 0.22 Sama_2668 PspA/IM30 (RefSeq) low > 62
Caulobacter crescentus NA1000 0.14 CCNA_02227 LysR-family transcriptional regulator 0.16 CCNA_02447 PspA/IM30 family regulatory protein low > 66
Caulobacter crescentus NA1000 Δfur 0.14 CCNA_02227 LysR-family transcriptional regulator 0.16 CCNA_02447 PspA/IM30 family regulatory protein low > 67

Not shown: 42 genomes with orthologs for ECD_00078 only; 3 genomes with orthologs for ECD_04049 only