Conservation of cofitness between ECD_03281 and ECD_03935 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03281 glycogen synthase 1.0 ECD_03935 redox-sensitive transcriptional activator of soxS; autorepressor 0.42 46
Escherichia coli ECOR27 1.00 NOLOHH_08690 glgA glycogen synthase GlgA 1.00 NOLOHH_05120 soxR redox-sensitive transcriptional activator SoxR low > 75
Escherichia coli ECRC98 1.00 JDDGAC_20530 glgA glycogen synthase GlgA 1.00 JDDGAC_16505 soxR redox-sensitive transcriptional activator SoxR low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19625 glycogen synthase GlgA 0.99 ECOLIN_RS23510 redox-sensitive transcriptional activator SoxR low > 55
Escherichia fergusonii Becca 1.00 EFB2_00390 Glycogen synthase 0.99 EFB2_04528 Redox-sensitive transcriptional activator SoxR low > 86
Escherichia coli ECRC101 1.00 MCAODC_07430 glgA glycogen synthase GlgA 1.00 MCAODC_03380 soxR redox-sensitive transcriptional activator SoxR low > 87
Escherichia coli BW25113 1.00 b3429 glgA glycogen synthase (NCBI) 1.00 b4063 soxR DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00272 Glycogen synthase 1.00 OHPLBJKB_03978 Redox-sensitive transcriptional activator SoxR low > 73
Escherichia coli ECRC102 1.00 NIAGMN_14670 glgA glycogen synthase GlgA 1.00 NIAGMN_10715 soxR redox-sensitive transcriptional activator SoxR — —
Escherichia coli ECOR38 1.00 HEPCGN_15715 glgA glycogen synthase GlgA 0.99 HEPCGN_11485 soxR redox-sensitive transcriptional activator SoxR low > 87
Escherichia coli ECRC62 1.00 BNILDI_02825 glgA glycogen synthase GlgA 1.00 BNILDI_06405 soxR redox-sensitive transcriptional activator SoxR low > 75
Escherichia coli ECRC100 1.00 OKFHMN_16900 glgA glycogen synthase GlgA 1.00 OKFHMN_12870 soxR redox-sensitive transcriptional activator SoxR low > 80
Escherichia coli ECRC99 1.00 KEDOAH_11240 glgA glycogen synthase GlgA 1.00 KEDOAH_15280 soxR redox-sensitive transcriptional activator SoxR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.96 GFF1442 Redox-sensitive transcriptional activator SoxR low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type 0.93 EX28DRAFT_4241 redox-sensitive transcriptional activator SoxR low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_04311 Glycogen synthase 0.93 MPMX20_00282 Redox-sensitive transcriptional activator SoxR low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26200 starch synthase 0.89 BWI76_RS02000 transcriptional regulator low > 92
Pantoea sp. MT58 0.83 IAI47_01695 glycogen synthase GlgA 0.71 IAI47_17765 redox-sensitive transcriptional activator SoxR low > 76
Azospirillum brasilense Sp245 0.45 AZOBR_RS00855 glycogen synthase 0.61 AZOBR_RS31925 MerR family transcriptional regulator — —
Azospirillum sp. SherDot2 0.43 MPMX19_02225 Glycogen synthase 0.60 MPMX19_05872 Redox-sensitive transcriptional activator SoxR — —
Sinorhizobium meliloti 1021 0.41 SMc03924 glycogen synthase 0.60 SMc00182 transcriptional regulator — —
Agrobacterium fabrum C58 0.39 Atu4075 glycogen synthase 0.54 Atu3915 MerR family transcriptional regulator low > 89
Pseudomonas sp. S08-1 0.37 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase 0.61 OH686_20615 redox-sensitive transcriptional activator SoxR low > 80
Pseudomonas sp. RS175 0.36 PFR28_02145 Glycogen synthase 0.58 PFR28_02914 Redox-sensitive transcriptional activator SoxR low > 88
Pseudomonas fluorescens SBW25 0.36 PFLU_RS16410 glycogen synthase GlgA 0.64 PFLU_RS10090 redox-sensitive transcriptional activator SoxR low > 109
Pseudomonas simiae WCS417 0.36 PS417_14480 glycogen synthase 0.62 PS417_09440 MerR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS16410 glycogen synthase GlgA 0.64 PFLU_RS10090 redox-sensitive transcriptional activator SoxR low > 109
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.60 PfGW456L13_2312 Redox-sensitive transcriptional activator SoxR low > 87
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.62 Pf6N2E2_6074 Redox-sensitive transcriptional activator SoxR low > 103
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_26025 glycogen synthase 0.61 AO356_20930 MerR family transcriptional regulator low > 104
Pseudomonas putida KT2440 0.35 PP_4050 glycogen synthase 0.62 PP_2060 DNA-binding transcriptional dual regulator - SoxR-reversible one-electron oxidation of its [2Fe-2S] cluster, NADPH-dependent low > 96
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.56 Xcc-8004.1627.1 Redox-sensitive transcriptional activator SoxR — —
Alteromonas macleodii MIT1002 0.30 MIT1002_00235 Glycogen synthase 0.40 MIT1002_02913 Redox-sensitive transcriptional activator SoxR low > 70
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08685 glycogen synthase 0.48 CSW01_14440 redox-sensitive transcriptional activator SoxR low > 62

Not shown: 40 genomes with orthologs for ECD_03281 only; 4 genomes with orthologs for ECD_03935 only