Conservation of cofitness between ECD_03636 and ECD_03627 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03636 D-ribose ABC transporter permease 1.0 ECD_03627 transcriptional activator of asnA; autorepressor 0.48 4
Escherichia coli ECRC102 1.00 NIAGMN_12495 rbsC ribose ABC transporter permease 1.00 NIAGMN_12530 asnC transcriptional regulator AsnC
Escherichia coli ECRC62 1.00 BNILDI_04650 rbsC ribose ABC transporter permease 1.00 BNILDI_04615 asnC transcriptional regulator AsnC low > 75
Escherichia fergusonii Becca 1.00 EFB2_04883 Ribose import permease protein RbsC 1.00 EFB2_04890 Regulatory protein AsnC low > 86
Escherichia coli ECRC99 1.00 KEDOAH_13410 rbsC ribose ABC transporter permease 1.00 KEDOAH_13375 asnC transcriptional regulator AsnC
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04303 Ribose import permease protein RbsC 1.00 OHPLBJKB_04310 Regulatory protein AsnC low > 73
Escherichia coli ECRC101 1.00 MCAODC_05245 rbsC ribose ABC transporter permease 1.00 MCAODC_05280 asnC transcriptional regulator AsnC low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21560 ribose ABC transporter permease 1.00 ECOLIN_RS21525 transcriptional regulator AsnC low > 55
Escherichia coli ECRC98 1.00 JDDGAC_18360 rbsC ribose ABC transporter permease 1.00 JDDGAC_18395 asnC transcriptional regulator AsnC low > 86
Escherichia coli BW25113 1.00 b3750 rbsC ribose ABC transporter permease protein (NCBI) 1.00 b3743 asnC DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECRC100 1.00 OKFHMN_14740 rbsC ribose ABC transporter permease 1.00 OKFHMN_14775 asnC transcriptional regulator AsnC low > 80
Escherichia coli ECOR27 1.00 NOLOHH_06875 rbsC ribose ABC transporter permease 1.00 NOLOHH_06910 asnC transcriptional regulator AsnC low > 75
Escherichia coli ECOR38 1.00 HEPCGN_13450 rbsC ribose ABC transporter permease 1.00 HEPCGN_13490 asnC transcriptional regulator AsnC low > 87
Enterobacter sp. TBS_079 0.93 MPMX20_04617 Ribose import permease protein RbsC 0.94 MPMX20_04624 Regulatory protein AsnC low > 85
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4026 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 0.94 EX28DRAFT_4019 Transcriptional regulators low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF1707 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) 0.98 GFF1714 Regulatory protein AsnC low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS00280 ribose ABC transporter permease 0.97 BWI76_RS00245 transcriptional regulator AsnC 0.25 7
Pectobacterium carotovorum WPP14 0.90 HER17_RS21540 ribose ABC transporter permease 0.79 HER17_RS21590 transcriptional regulator AsnC low > 75
Dickeya dadantii 3937 0.87 DDA3937_RS00040 ribose ABC transporter permease 0.86 DDA3937_RS00010 transcriptional regulator AsnC low > 74
Serratia liquefaciens MT49 0.87 IAI46_25065 ribose ABC transporter permease 0.88 IAI46_25100 transcriptional regulator AsnC low > 86
Dickeya dianthicola ME23 0.87 DZA65_RS22305 ribose ABC transporter permease 0.86 DZA65_RS22350 transcriptional regulator AsnC low > 75
Dickeya dianthicola 67-19 0.87 HGI48_RS21325 ribose ABC transporter permease 0.86 HGI48_RS21370 transcriptional regulator AsnC low > 71
Pantoea sp. MT58 0.85 IAI47_00360 ribose ABC transporter permease 0.86 IAI47_00310 transcriptional regulator AsnC low > 76
Rahnella sp. WP5 0.85 EX31_RS06180 ribose ABC transporter permease 0.84 EX31_RS06150 transcriptional regulator AsnC low > 89
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_14655 ribose ABC transporter permease 0.69 CSW01_00385 transcriptional regulator AsnC low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.45 ABZR88_RS15230 ABC transporter permease 0.46 ABZR88_RS21700 Lrp/AsnC ligand binding domain-containing protein
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_1280 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 0.43 Echvi_3066 Transcriptional regulators
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_2570 monosaccharide ABC transporter membrane protein, CUT2 family 0.20 Psyr_4299 transcriptional regulator, AsnC family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_2570 monosaccharide ABC transporter membrane protein, CUT2 family 0.20 Psyr_4299 transcriptional regulator, AsnC family low > 86
Sinorhizobium meliloti 1021 0.37 SM_b21375 sugar uptake ABC transporter permease 0.22 SMc00425 transcriptional regulator low > 103
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS03365 fructose ABC transporter, permease component (FrcC) (from data) 0.21 RR42_RS03950 AsnC family transcriptional regulator
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_21390 m-Inositol ABC transporter, permease component (iatP) (from data) 0.20 AO353_22665 AsnC family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_4287 Inositol transport system permease protein 0.20 Pf1N1B4_2734 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system low > 87
Variovorax sp. OAS795 0.27 ABID97_RS00430 ABC transporter permease 0.23 ABID97_RS26495 Lrp/AsnC family transcriptional regulator low > 91

Not shown: 25 genomes with orthologs for ECD_03636 only; 21 genomes with orthologs for ECD_03627 only