Conservation of cofitness between ECD_02249 and ECD_03511 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02249 fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme 1.0 ECD_03511 glutamate transporter 0.56 15
Escherichia coli BW25113 1.00 b2324 b2324 putative peptidase (VIMSS) 1.00 b3653 gltS glutamate transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01381 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 1.00 OHPLBJKB_00048 Sodium/glutamate symporter low > 73
Escherichia coli ECRC62 0.99 BNILDI_13195 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.00 BNILDI_04100 gltS sodium/glutamate symporter low > 75
Escherichia coli ECOR27 0.97 NOLOHH_14275 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.00 NOLOHH_07420 gltS sodium/glutamate symporter low > 75
Escherichia coli ECRC100 0.96 OKFHMN_22640 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.00 OKFHMN_15535 gltS sodium/glutamate symporter low > 80
Escherichia coli ECRC98 0.96 JDDGAC_26600 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.00 JDDGAC_19160 gltS sodium/glutamate symporter low > 86
Escherichia coli ECRC101 0.96 MCAODC_13680 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.00 MCAODC_06045 gltS sodium/glutamate symporter low > 87
Escherichia coli ECRC99 0.96 KEDOAH_05555 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.00 KEDOAH_12610 gltS sodium/glutamate symporter
Escherichia coli ECRC102 0.96 NIAGMN_20415 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.00 NIAGMN_13295 gltS sodium/glutamate symporter
Escherichia fergusonii Becca 0.95 EFB2_01534 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.99 EFB2_00135 Sodium/glutamate symporter low > 86
Escherichia coli ECOR38 0.95 HEPCGN_21845 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.00 HEPCGN_14360 gltS sodium/glutamate symporter low > 87
Escherichia coli Nissle 1917 0.94 ECOLIN_RS13465 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.99 ECOLIN_RS20805 sodium/glutamate symporter low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1945 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.82 GFF353 Sodium/glutamate symport protein low > 78
Enterobacter sp. TBS_079 0.75 MPMX20_03259 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.84 MPMX20_00083 Sodium/glutamate symporter low > 85
Enterobacter asburiae PDN3 0.75 EX28DRAFT_0280 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 0.85 EX28DRAFT_3902 sodium--glutamate symport carrier (gltS) low > 76
Klebsiella michiganensis M5al 0.73 BWI76_RS20410 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.80 BWI76_RS27520 sodium/glutamate symporter low > 92
Serratia liquefaciens MT49 0.62 IAI46_18000 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.72 IAI46_24910 sodium/glutamate symporter low > 86
Rahnella sp. WP5 0.61 EX31_RS19660 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.73 EX31_RS15830 sodium/glutamate symporter low > 89
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.38 CSW01_14255 sodium/glutamate symporter low > 62
Pseudomonas putida KT2440 0.32 PP_1751 methyltransferase/FAD-dependent oxidoreductase 0.60 PP_0996 glutamate:sodium symporter low > 96
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.60 AO356_12510 sodium:glutamate symporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.58 Pf6N2E2_4368 Sodium/glutamate symport protein low > 103
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.60 PfGW456L13_786 Sodium/glutamate symport protein low > 87
Shewanella sp. ANA-3 0.26 Shewana3_1474 FAD dependent oxidoreductase (RefSeq) 0.41 Shewana3_1541 sodium/glutamate symporter (RefSeq) low > 73
Shewanella oneidensis MR-1 0.25 SO3073 conserved hypothetical protein (NCBI ptt file) 0.43 SO2923 gltS sodium/glutamate symporter (NCBI ptt file) low > 76
Paraburkholderia graminis OAS925 0.24 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.63 ABIE53_001025 ESS family glutamate:Na+ symporter low > 113
Shewanella loihica PV-4 0.23 Shew_2411 FAD dependent oxidoreductase (RefSeq) 0.43 Shew_0103 sodium/glutamate symporter (RefSeq) low > 60
Acinetobacter radioresistens SK82 0.22 MPMX26_02642 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.48 MPMX26_00622 Sodium/glutamate symporter low > 36

Not shown: 37 genomes with orthologs for ECD_02249 only; 5 genomes with orthologs for ECD_03511 only