Conservation of cofitness between ECD_02273 and ECD_03127 in Escherichia coli BL21

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02273 putative inner membrane protein 1.0 ECD_03127 putative amino acid ABC transporter permease 0.56 13
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01359 Inner membrane protein YfdC 0.99 OHPLBJKB_00435 hypothetical protein low > 73
Escherichia coli BW25113 1.00 b2347 yfdC predicted inner membrane protein (NCBI) 1.00 b3269 yhdX predicted amino-acid transporter subunit (NCBI) low > 76
Escherichia coli ECRC99 0.99 KEDOAH_05665 yfdC Inner membrane protein YfdC 1.00 KEDOAH_10520 yhdX Putative amino-acid ABC transporter permease protein YhdX
Escherichia coli ECOR38 0.99 HEPCGN_21725 yfdC Inner membrane protein YfdC 0.99 HEPCGN_16450 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 87
Escherichia coli ECRC62 0.99 BNILDI_13075 yfdC Inner membrane protein YfdC 1.00 BNILDI_02100 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 75
Escherichia coli ECOR27 0.99 NOLOHH_14165 yfdC Inner membrane protein YfdC 1.00 NOLOHH_09420 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 75
Escherichia coli ECRC101 0.99 MCAODC_13560 yfdC Inner membrane protein YfdC 1.00 MCAODC_08150 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 87
Escherichia coli ECRC100 0.99 OKFHMN_22530 yfdC Inner membrane protein YfdC 1.00 OKFHMN_17630 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 80
Escherichia coli ECRC102 0.99 NIAGMN_20305 yfdC Inner membrane protein YfdC 1.00 NIAGMN_15390 yhdX Putative amino-acid ABC transporter permease protein YhdX
Escherichia coli ECRC98 0.99 JDDGAC_26490 yfdC Inner membrane protein YfdC 1.00 JDDGAC_21255 yhdX Putative amino-acid ABC transporter permease protein YhdX low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS13575 formate/nitrite transporter family protein 0.98 ECOLIN_RS18780 amino acid ABC transporter permease low > 55
Escherichia fergusonii Becca 0.98 EFB2_01513 Inner membrane protein YfdC 0.98 EFB2_00554 hypothetical protein low > 86
Enterobacter asburiae PDN3 0.82 EX28DRAFT_0266 Formate/nitrite family of transporters 0.89 EX28DRAFT_3322 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_03273 Inner membrane protein YfdC 0.89 MPMX20_04178 hypothetical protein low > 85
Pantoea sp. MT58 0.70 IAI47_06060 formate/nitrite transporter family protein 0.78 IAI47_02370 amino acid ABC transporter permease low > 76
Rahnella sp. WP5 0.64 EX31_RS19775 formate/nitrite transporter family protein 0.79 EX31_RS12150 amino acid ABC transporter permease low > 89
Pectobacterium carotovorum WPP14 0.61 HER17_RS06850 formate/nitrite transporter family protein 0.75 HER17_RS20295 amino acid ABC transporter permease low > 75
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3126 transporter, putative 0.61 Psyr_1073 amino acid ABC transporter membrane protein 1, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3126 transporter, putative 0.61 Psyr_1073 amino acid ABC transporter membrane protein 1, PAAT family low > 86
Pseudomonas putida KT2440 0.45 PP_1156 putative inner membrane protein 0.59 PP_1298 putative amino acid ABC transporter - permease subunit low > 96
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_1053 Putative transport 0.58 PfGW456L13_1699 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) low > 87
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4642 Putative transport 0.57 Pf6N2E2_5403 ABC transporter for D-Alanine, permease component 2 (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_13620 hypothetical protein 0.60 AO356_17385 amino acid ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_2387 Putative transport 0.59 Pf1N1B4_916 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) low > 87
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS28145 formate transporter 0.60 PFLU_RS04965 amino acid ABC transporter permease low > 109
Pseudomonas simiae WCS417 0.44 PS417_26490 membrane protein 0.59 PS417_04905 amino acid ABC transporter permease low > 88
Pseudomonas fluorescens SBW25 0.44 PFLU_RS28145 formate transporter 0.60 PFLU_RS04965 amino acid ABC transporter permease low > 109
Pseudomonas sp. RS175 0.44 PFR28_04199 Inner membrane protein YfdC 0.60 PFR28_03541 hypothetical protein low > 88
Dinoroseobacter shibae DFL-12 0.33 Dshi_3922 transport protein, putative (RefSeq) 0.34 Dshi_0319 polar amino acid ABC transporter, inner membrane subunit (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.32 PGA1_c02350 inner membrane protein YfdC 0.36 PGA1_c01990 glutamate/glutamine/aspartate/asparagine transport system permease protein BztB low > 62

Not shown: 10 genomes with orthologs for ECD_02273 only; 21 genomes with orthologs for ECD_03127 only