Conservation of cofitness between ECD_02883 and ECD_02753 in Escherichia coli BL21

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02883 transcriptional activator of yqhD 1.0 ECD_02753 oxidative stress defense protein 0.72 3
Escherichia coli ECOR38 1.00 HEPCGN_17815 yqhC DNA-binding transcriptional regulator YqhC 0.99 HEPCGN_18720 yggE oxidative stress defense protein low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00691 HTH-type transcriptional activator RhaS 1.00 OHPLBJKB_00794 26 kDa periplasmic immunogenic protein low > 73
Escherichia coli ECRC100 1.00 OKFHMN_18950 yqhC DNA-binding transcriptional regulator YqhC 0.99 OKFHMN_19415 yggE oxidative stress defense protein low > 80
Escherichia coli ECRC62 1.00 BNILDI_00790 yqhC DNA-binding transcriptional regulator YqhC 0.99 BNILDI_09860 yggE oxidative stress defense protein low > 75
Escherichia coli ECRC102 1.00 NIAGMN_16715 yqhC DNA-binding transcriptional regulator YqhC 0.99 NIAGMN_17180 yggE oxidative stress defense protein — —
Escherichia coli ECRC99 1.00 KEDOAH_09195 yqhC DNA-binding transcriptional regulator YqhC 0.99 KEDOAH_08725 yggE oxidative stress defense protein — —
Escherichia coli ECRC101 1.00 MCAODC_09465 yqhC DNA-binding transcriptional regulator YqhC 0.99 MCAODC_09935 yggE oxidative stress defense protein low > 87
Escherichia coli ECRC98 1.00 JDDGAC_22585 yqhC DNA-binding transcriptional regulator YqhC 0.99 JDDGAC_23045 yggE oxidative stress defense protein low > 86
Escherichia coli BW25113 1.00 b3010 yqhC putative ARAC-type regulatory protein (VIMSS) 1.00 b2922 yggE hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_10725 yqhC DNA-binding transcriptional regulator YqhC 0.99 NOLOHH_11325 yggE oxidative stress defense protein low > 75
Escherichia fergusonii Becca 0.99 EFB2_00800 HTH-type transcriptional activator RhaS 0.98 EFB2_00984 26 kDa periplasmic immunogenic protein low > 86
Escherichia coli Nissle 1917 0.93 ECOLIN_RS17325 DNA-binding transcriptional regulator YqhC 0.99 ECOLIN_RS16240 oxidative stress defense protein low > 55
Klebsiella michiganensis M5al 0.83 BWI76_RS24295 AraC family transcriptional regulator 0.86 BWI76_RS23960 oxidative stress defense protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF3122 Transcriptional regulator, AraC family 0.82 GFF3017 Protein of unknown function DUF541 low > 78
Enterobacter asburiae PDN3 0.77 EX28DRAFT_3048 AraC-type DNA-binding domain-containing proteins 0.80 EX28DRAFT_2968 Uncharacterized conserved protein low > 76
Enterobacter sp. TBS_079 0.75 MPMX20_03854 HTH-type transcriptional activator RhaS 0.80 MPMX20_03774 26 kDa periplasmic immunogenic protein low > 85
Pantoea sp. MT58 0.61 IAI47_03205 AraC family transcriptional regulator 0.63 IAI47_03710 oxidative stress defense protein low > 76
Rahnella sp. WP5 0.56 EX31_RS08035 AraC family transcriptional regulator 0.65 EX31_RS21445 oxidative stress defense protein low > 89
Serratia liquefaciens MT49 0.55 IAI46_21745 AraC family transcriptional regulator 0.65 IAI46_20915 oxidative stress defense protein low > 86
Dickeya dianthicola ME23 0.54 DZA65_RS01775 AraC family transcriptional regulator 0.60 DZA65_RS19555 oxidative stress defense protein low > 75
Dickeya dianthicola 67-19 0.53 HGI48_RS01700 AraC family transcriptional regulator 0.60 HGI48_RS18420 oxidative stress defense protein low > 71
Dickeya dadantii 3937 0.53 DDA3937_RS01805 AraC family transcriptional regulator 0.63 DDA3937_RS18495 oxidative stress defense protein low > 74
Pectobacterium carotovorum WPP14 0.51 HER17_RS19700 AraC family transcriptional regulator 0.64 HER17_RS02710 oxidative stress defense protein low > 75
Shewanella loihica PV-4 0.32 Shew_0071 AraC family transcriptional regulator (RefSeq) 0.25 Shew_3168 hypothetical protein (RefSeq) low > 60
Lysobacter sp. OAE881 0.29 ABIE51_RS08850 AraC family transcriptional regulator 0.13 ABIE51_RS06775 SIMPL domain-containing protein low > 62
Rhizobium sp. OAE497 0.25 ABIE40_RS03900 AraC family transcriptional regulator 0.17 ABIE40_RS12160 SIMPL domain-containing protein low > 107
Sinorhizobium meliloti 1021 0.22 SM_b20344 transcriptional regulator 0.15 SMc01556 hypothetical protein low > 103
Shewanella sp. ANA-3 0.22 Shewana3_1698 AraC family transcriptional regulator (RefSeq) 0.29 Shewana3_3626 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.22 Sama_2712 AraC family transcriptional regulator (RefSeq) 0.24 Sama_3310 hypothetical protein (RefSeq) low > 62
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1800.1 hypothetical protein 0.14 Xcc-8004.1878.1 Protein of unknown function DUF541 low > 74

Not shown: 25 genomes with orthologs for ECD_02883 only; 8 genomes with orthologs for ECD_02753 only