Conservation of cofitness between ECD_01634 and ECD_02494 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01634 multidrug efflux system transporter 1.0 ECD_02494 OM lipoprotein putative positive effector of YfiN activity 0.63 2
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02061 Multidrug resistance protein MdtK 1.00 OHPLBJKB_01101 hypothetical protein low > 73
Escherichia fergusonii Becca 1.00 EFB2_02329 Multidrug resistance protein MdtK 0.99 EFB2_01287 Peptidoglycan-associated lipoprotein low > 86
Escherichia coli BW25113 1.00 b1663 mdtK multidrug efflux protein NorM (NCBI) 1.00 b2605 yfiB predicted outer membrane lipoprotein (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_17880 mdtK multidrug efflux MATE transporter MdtK 1.00 NOLOHH_12870 yfiB OmpA family protein — —
Escherichia coli ECRC62 1.00 BNILDI_16670 mdtK multidrug efflux MATE transporter MdtK 1.00 BNILDI_11675 yfiB OmpA family protein — —
Escherichia coli ECOR38 1.00 HEPCGN_05745 mdtK multidrug efflux MATE transporter MdtK 0.98 HEPCGN_20315 yfiB OmpA family protein low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS09270 multidrug efflux MATE transporter MdtK 0.99 ECOLIN_RS14725 OmpA family protein — —
Escherichia coli ECRC99 1.00 KEDOAH_00750 mdtK multidrug efflux MATE transporter MdtK 1.00 KEDOAH_07025 yfiB OmpA family protein — —
Escherichia coli ECRC98 1.00 JDDGAC_01950 mdtK multidrug efflux MATE transporter MdtK 1.00 JDDGAC_24860 yfiB OmpA family protein — —
Escherichia coli ECRC102 1.00 NIAGMN_00705 mdtK multidrug efflux MATE transporter MdtK 0.99 NIAGMN_18965 yfiB OmpA family protein — —
Escherichia coli ECRC101 1.00 OKFHMN_27360 mdtK multidrug efflux MATE transporter MdtK 0.99 OKFHMN_21195 yfiB OmpA family protein — —
Escherichia coli ECRC101 1.00 MCAODC_18050 mdtK multidrug efflux MATE transporter MdtK 0.99 MCAODC_11725 yfiB OmpA family protein — —
Enterobacter sp. TBS_079 0.91 MPMX20_01973 Multidrug resistance protein MdtK 0.77 MPMX20_03473 Peptidoglycan-associated lipoprotein low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS16535 MATE family efflux transporter 0.75 BWI76_RS21495 outer membrane lipoprotein low > 92
Enterobacter asburiae PDN3 0.89 EX28DRAFT_1660 putative efflux protein, MATE family 0.77 EX28DRAFT_2706 Outer membrane protein and related peptidoglycan-associated (lipo)proteins low > 76
Serratia liquefaciens MT49 0.77 IAI46_11210 MATE family efflux transporter 0.51 IAI46_02970 OmpA family protein 0.41 36
Pantoea sp. MT58 0.76 IAI47_10820 MATE family efflux transporter 0.55 IAI47_20470 OmpA family protein low > 76
Rahnella sp. WP5 0.72 EX31_RS13855 MATE family efflux transporter 0.45 EX31_RS04235 OmpA family protein low > 89
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_00550 MATE family efflux transporter 0.34 AO353_06005 hypothetical protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS07610 MATE family efflux transporter 0.33 PFLU_RS25570 OmpA family protein low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS07610 MATE family efflux transporter 0.33 PFLU_RS25570 OmpA family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3892 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.35 Pf1N1B4_1231 Integral membrane protein YfiB low > 87
Pseudomonas simiae WCS417 0.41 PS417_07530 multidrug transporter 0.32 PS417_23755 membrane protein low > 88
Pseudomonas sp. RS175 0.41 PFR28_01102 Multidrug resistance protein NorM 0.34 PFR28_00011 Peptidoglycan-associated lipoprotein low > 88
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_02370 MATE family efflux transporter 0.32 AO356_07895 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2298 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 0.34 Pf6N2E2_3455 Integral membrane protein YfiB low > 103
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS13335 multidrug transporter MatE 0.36 RR42_RS22845 cell envelope biogenesis protein OmpA low > 128
Pseudomonas putida KT2440 0.19 PP_5262 Probable multidrug resistance protein NorM 0.34 PP_4669 OmpA family protein low > 96

Not shown: 64 genomes with orthologs for ECD_01634 only; 1 genomes with orthologs for ECD_02494 only