Conservation of cofitness between ECD_04080 and ECD_02054 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04080 D-alanine/D-serine/glycine transporter 1.0 ECD_02054 putative response regulator in two-component system withYehU 0.55 15
Escherichia coli ECRC102 1.00 NIAGMN_09920 cycA D-serine/D-alanine/glycine transporter 1.00 NIAGMN_21850 btsR two-component system response regulator BtsR — —
Escherichia coli ECRC62 1.00 BNILDI_07190 cycA D-serine/D-alanine/glycine transporter 0.99 BNILDI_14185 btsR two-component system response regulator BtsR low > 75
Escherichia coli ECRC98 1.00 JDDGAC_15710 cycA D-serine/D-alanine/glycine transporter 1.00 JDDGAC_28005 btsR two-component system response regulator BtsR low > 86
Escherichia coli BW25113 1.00 b4208 cycA D-alanine/D-serine/glycine transporter (NCBI) 1.00 b2125 yehT orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_16085 cycA D-serine/D-alanine/glycine transporter 1.00 KEDOAH_04250 btsR two-component system response regulator BtsR — —
Escherichia coli ECOR27 1.00 NOLOHH_04330 cycA D-serine/D-alanine/glycine transporter 1.00 NOLOHH_15235 btsR two-component system response regulator BtsR low > 75
Escherichia coli ECRC101 1.00 MCAODC_02585 cycA D-serine/D-alanine/glycine transporter 1.00 MCAODC_21245 btsR two-component system response regulator BtsR low > 87
Escherichia coli ECRC100 1.00 OKFHMN_12070 cycA D-serine/D-alanine/glycine transporter 1.00 OKFHMN_23915 btsR two-component system response regulator BtsR low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24450 D-serine/D-alanine/glycine transporter 1.00 ECOLIN_RS12450 two-component system response regulator BtsR low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03827 D-serine/D-alanine/glycine transporter 1.00 OHPLBJKB_01586 Transcriptional regulatory protein BtsR low > 73
Escherichia fergusonii Becca 0.99 EFB2_04320 D-serine/D-alanine/glycine transporter 1.00 EFB2_01731 Transcriptional regulatory protein BtsR 0.39 70
Escherichia coli ECOR38 0.99 HEPCGN_10275 cycA D-serine/D-alanine/glycine transporter 0.99 HEPCGN_02640 btsR two-component system response regulator BtsR low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF861 D-serine/D-alanine/glycine transporter 0.95 GFF3820 Two-component response-regulatory protein YehT low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_00484 D-serine/D-alanine/glycine transporter 0.91 MPMX20_03092 Transcriptional regulatory protein BtsR low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3391 Gamma-aminobutyrate permease and related permeases 0.91 EX28DRAFT_0437 two component transcriptional regulator, LytTR family low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS02700 D-serine/D-alanine/glycine transporter 0.88 BWI76_RS19470 DNA-binding response regulator low > 92
Serratia liquefaciens MT49 0.85 IAI46_09060 D-serine/D-alanine/glycine transporter 0.64 IAI46_23615 two-component system response regulator BtsR low > 86
Rahnella sp. WP5 0.80 EX31_RS24110 D-serine/D-alanine/glycine transporter 0.76 EX31_RS00780 two-component system response regulator BtsR low > 89
Pectobacterium carotovorum WPP14 0.78 HER17_RS07690 D-serine/D-alanine/glycine transporter 0.57 HER17_RS05370 two-component system response regulator BtsR low > 75
Erwinia tracheiphila SCR3 0.76 LU632_RS10160 cycA D-serine/D-alanine/glycine transporter 0.73 LU632_RS20440 btsR two-component system response regulator BtsR low > 74
Dickeya dadantii 3937 0.76 DDA3937_RS13720 D-serine/D-alanine/glycine transporter 0.71 DDA3937_RS16365 two-component system response regulator BtsR low > 74
Pseudomonas putida KT2440 0.74 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease 0.17 PP_0185 Positive alginate biosynthesis regulatory protein low > 96
Dickeya dianthicola ME23 0.73 DZA65_RS14305 D-serine/D-alanine/glycine transporter 0.72 DZA65_RS17550 two-component system response regulator BtsR low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS13815 D-serine/D-alanine/glycine transporter 0.72 HGI48_RS16465 two-component system response regulator BtsR low > 71
Rhodanobacter denitrificans MT42 0.65 LRK55_RS15360 D-serine/D-alanine/glycine transporter 0.21 LRK55_RS00285 LytTR family DNA-binding domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS15610 D-serine/D-alanine/glycine transporter 0.21 LRK54_RS00550 LytTR family DNA-binding domain-containing protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.804.1 D-serine/D-alanine/glycine transporter 0.23 Xcc-8004.830.1 Autolysis response regulater LytR low > 74
Pseudomonas fluorescens SBW25 0.61 PFLU_RS09900 amino acid permease 0.17 PFLU_RS29215 response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS09900 amino acid permease 0.17 PFLU_RS29215 response regulator transcription factor low > 109
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_29455 amino acid transporter 0.17 AO356_12785 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_4976 D-serine/D-alanine/glycine transporter 0.19 Pf1N1B4_2184 Autolysis response regulater LytR low > 87
Pseudomonas simiae WCS417 0.55 PS417_14545 amino acid transporter 0.17 PS417_27535 chemotaxis protein CheY low > 88
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_25190 amino acid transporter 0.18 AO353_08995 chemotaxis protein CheY low > 101

Not shown: 7 genomes with orthologs for ECD_04080 only; 34 genomes with orthologs for ECD_02054 only